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Galaxy Development List Archive

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Galaxy

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy service makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.

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Topics (8791)
Replies Last Post Views
The January 2017 (17.01) Galaxy release is out. Now with Conda 🐍 for everybody! by Jennifer Hillman-Jac...
1
by Jennifer Hillman-Jac...
Blast db permission by Mohamed Kassam
4
by SAPET, Frederic
nginx x-accel by Briand, Sheldon (NRC...
1
by Briand, Sheldon (NRC...
SLURM configuration problem by Leonor Palmeira
6
by Marius van den Beek
list of names, variables that cannot be used inside XML by Jochen
2
by Jochen
Problem with dataset_permissions and roles by Lemley, Rob
0
by Lemley, Rob
regarding tool dependencies by Nir Shachaf
2
by Martin Čech
Last stable galaxy Release 16.10 or 17.01 ? by NGS & Bioinformatics...
2
by NGS & Bioinformatics...
ImportError and Project life cycle by Matthias Bernt
7
by Matthias Bernt
GalaxyAdmins meetup starting soon by Enis Afgan-3
0
by Enis Afgan-3
Bad UID exception with pbs_python on galaxy 16_10 and torque 6.02 by Vandeweyer Geert
0
by Vandeweyer Geert
GalaxyAdmins online meetup: this Thursday by Enis Afgan-3
1
by Dave Clements-2
Fwd: Galaxy on the Amazon cloud by Jennifer Hillman-Jac...
0
by Jennifer Hillman-Jac...
Upgrade migration scripts by Matthias Bernt
1
by Martin Čech
GalaxyAdmins online meetup: call details by Enis Afgan-3
0
by Enis Afgan-3
Galaxy Restart & Jobs finishing by Yip, Miu ki
0
by Yip, Miu ki
How to build a fresh Docker image from the latest Galaxy by Md. Rezaul Karim
0
by Md. Rezaul Karim
Relabeling dataset pairs in 'list:paired' collection by Peter Briggs
2
by Peter Briggs
Error in fresh galaxy install by evan clark
0
by evan clark
Tools using Galaxy's Python library? by Peter Cock
8
by Peter Cock
Newline characters for txt files by Lawrence, Cris W
0
by Lawrence, Cris W
Configuring Galaxy, Pulsar and Conda by ric
2
by ric
Create a new datatype svg by Jochen
9
by Peter Cock
Issue when using xsendfile with galaxy release_16.07 by SAPET, Frederic
4
by SAPET, Frederic
Pulsar Metadata by Joe Greer
1
by John Chilton-4
GalaxyAdmins Feb online meetup (Enis Afgan) by David Kovalic
0
by David Kovalic
Vote for the Training you would like to see at GCC2017 by Dave Clements-2
1
by Dave Clements-2
Request more details from Nikolaos Tur about pyBamTools & pyBamParser dependency packages message by Jennifer Hsieh
7
by Jennifer Hsieh
GalaxyAdmins Feb online meetup by Enis Afgan-3
0
by Enis Afgan-3
AD/LDAP Integration by Yip, Miu ki
1
by Hans-Rudolf Hotz
Question about Data Managers by Carlos Lijeron
1
by Daniel Blankenberg
Ampliocn Sequencing by Abebe Fola
0
by Abebe Fola
How to include local tools with Docker image of Galaxy ? by Md. Rezaul Karim
2
by Md. Rezaul Karim
Peter Cock <p.j.a.cock@googlemail.com> by Eduardo de Paiva Alv...
1
by Peter Cock
psiblast by De paiva Alves, Edua...
1
by Peter Cock
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