Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9000)
Replies Last Post Views
broken after upgrade to 17.09 : uploading files via the API by Hans-Rudolf Hotz
1
by John Chilton-4
European Galaxy Administrator Workshop, 8-12 January 2018, Oslo. FREE by Dave Clements-2
0
by Dave Clements-2
tool dependencies by Matthias Bernt
0
by Matthias Bernt
external display and data editing by Nils Paulhe
0
by Nils Paulhe
Active Directory Authentication question by Hakeem Almabrazi-2
4
by Hakeem Almabrazi-2
Fwd: Job Script Integrity with GalaxyKickStart (galaxy-dev Digest, Vol 137, Issue 5) by Christophe Antoniews...
6
by John Letaw
AWS launch error by David Kovalic
4
by Nuwan Goonasekera-2
Delete a record from a Tool Data Table via the Galaxy API by Dan Fornika
0
by Dan Fornika
Job Script Integrity by John Letaw
0
by John Letaw
Diffbind error by Beginner TI
0
by Beginner TI
html with styles by Wolfgang Maier
5
by Wolfgang Maier
Upload tool incorrect path by evan clark
0
by evan clark
Enable viewing of large HTML files by Peter Briggs
2
by Peter Briggs
AWS launch error by Sijung Yun
1
by Enis Afgan-3
bam_to_bigwig invalid syntax error by Marco Tangaro
1
by Nicola Soranzo-2
Metadata setting python dependencies by Ulf
5
by Ulf
GX-2017-0001: Limited Galaxy Data Library unauthorized filesystem access by Nate Coraor (nate@bx...
0
by Nate Coraor (nate@bx...
Urgent help needed by Durdevic, Marija
7
by Deepak Tanwar
contribute to tools without github by Matthias Bernt
1
by Peter Cock
Re: galaxy-dev Digest, Vol 136, Issue 11 by M_Enders
0
by M_Enders
error despite success by Matthias Bernt
6
by Devon Ryan-2
Problems with BlastDB.loc by Enders Matthias
1
by Peter Cock
Re: galaxy-dev Digest, Vol 136, Issue 8 by M_Enders
6
by Hans-Rudolf Hotz
Problems with the test tool shed? by Von Kuster, Greg
1
by Martin Čech
primer blast tool by Jochen
0
by Jochen
Call for presentations at GMOD workshop at PAG by Scott Cain
0
by Scott Cain
GMOD hackathon before PAG San Diego in January by Scott Cain
0
by Scott Cain
Show history structure : Error 'Undefined' object is not callable by juliech
1
by Marius van den Beek
another conda problem by Matthias Bernt
0
by Matthias Bernt
conda bash environment problem as real user by Matthias Bernt
1
by Gildas Le Corguillé
Announcing the Galactic Blog, and a call for posts by Dave Clements-2
0
by Dave Clements-2
Worklist failing on collection with AttributeError: 'object' object has no attribute 'collection' by BigTA78
2
by Marius van den Beek
WebDAV client Galaxy by Mohamed Kassam
0
by Mohamed Kassam
Toolshed partial installation ? deeptools error by juliech
7
by juliech
data_manager_gatk_picard_index_builder "no space left" by Laurent Fournier
0
by Laurent Fournier
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