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Galaxy

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy service makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.

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Topics (8576)
Replies Last Post Views
Workflow Compatibility by Katherine Beaulieu
9
by Langhorst, Brad
Upgrade to Galaxy 16.07, import dumps problem by D K
8
by D K
Loading a GUI on galaxy by Lijo John
0
by Lijo John
Introducing Conda as a new standard for Galaxy tool dependencies by Björn Grüning-3
0
by Björn Grüning-3
The new Galaxy release July 2016 Galaxy Release (v 16.07) is out! by Jennifer Hillman-Jac...
0
by Jennifer Hillman-Jac...
Loading GUI on galaxy by Lijo John
0
by Lijo John
Putting it all together - toolshed tool + conda dependency by Steve Cassidy
4
by Marius van den Beek
Parameter Storing in Database by Katherine Beaulieu
2
by Katherine Beaulieu
problem with local toolshed by Vincent Cahais
3
by Vincent Cahais
Still an issue with PBS Pro by SAPET, Frederic
0
by SAPET, Frederic
Issue when using a symbolyc link and try to import history by SAPET, Frederic
0
by SAPET, Frederic
Issue when using xsendfile with galaxy release_16.07 by SAPET, Frederic
1
by SAPET, Frederic
Galaxy Admin Training: November 7-11, Salt Lake City by Dave Clements-2
0
by Dave Clements-2
sending data by Labdros drosophila
1
by Jennifer Hillman-Jac...
Workflow ID, Galaxy Instance URL, API Key in Galaxy Tool Config by Katherine Beaulieu
0
by Katherine Beaulieu
ansible install tools: tools not in section by Tamir,Ido
2
by Tamir,Ido
Docker ToolShed Imports Issue by Yip, Miu ki
0
by Yip, Miu ki
GalaxyAdmins online meetup this Thursday: Dynamic Job expansion: Experiences using Makeflow in Galaxy by Dave Clements-2
1
by Dave Clements-2
liftOver output database error by Sarah DIEHL-3
1
by Nicola Soranzo-2
Galaxy Workflow delete intermediate files by D K
2
by D K
Consuming dataset collections by Steve Cassidy
3
by John Chilton-4
problems with 'action type="metadata" name="dbkey"' in tool xml by Hans-Rudolf Hotz
7
by Hans-Rudolf Hotz
Error running JBrowse by Raymond Wan
2
by Raymond Wan
Modifying a Cloud Cluster Instance by Lapointe, David
1
by Lapointe, David
Adding a download link to the "Download or Export Workflow" page with load balancing by Alex Rodriguez-2
4
by Alex Rodriguez-2
Travis CI for Galaxy repositories? by Peter van Heusden
1
by Björn Grüning-3
Doubled arguments from loc files in tests by Peter Cock
1
by Peter Cock
Connecting LDAP with Galaxy by Yip, Miu ki
11
by Tiago Antao
view details not working by Vincent Cahais
4
by Vincent Cahais
External user auth and API by Sarah DIEHL-3
6
by Eric Rasche-2
Adding packages to depot.galaxyproject.org by Peter Cock
5
by Peter Cock
pop up on click by Mohamed Kassam
0
by Mohamed Kassam
conversion issue by Rathert, Philipp, Dr...
5
by Rathert, Philipp, Dr...
uploading multi-file archives and creation of potentially large collections by Stephan Oepen
3
by John Chilton-4
provide a field to upload a file as part of tool input by ryang
2
by Björn Grüning-3
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