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Addind new datatype - best practice

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Addind new datatype - best practice

Floreline TOUCHARD
Hi Galaxy community,

I would like to add custom datatypes to my Galaxy server without editing any Galaxy files if possible.
I've already created and renamed a second config/datatype.conf file. Both files are listed into galaxy.ini (variable datatypes_config_file).
But what about the new datatype Class ? For example if it's a binary class, how can I add this class without editing the binary.py file or any other file (if it's possible) ?

Thanks in advance,
Floreline


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Re: Addind new datatype - best practice

Björn Grüning-3
Hi,

you could put one additional file into lib/galaxy/datatypes/
or you could have datatypes as Tool Shed repository. The really
recommended way currently is to put then into Galaxy main. So please
create a PR and add your datatypes to Galaxy directly if you like.

Ciao,
Bjoern

Am 11.12.2016 um 19:08 schrieb Floreline TOUCHARD:

> Hi Galaxy community,
>
> I would like to add custom datatypes to my Galaxy server without editing
> any Galaxy files if possible.
> I've already created and renamed a second config/datatype.conf file.
> Both files are listed into galaxy.ini (variable datatypes_config_file).
> But what about the new datatype Class ? For example if it's a binary
> class, how can I add this class without editing the binary.py file or
> any other file (if it's possible) ?
>
> Thanks in advance,
> Floreline
>
>
>
> ___________________________________________________________
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
>   https://lists.galaxyproject.org/
>
> To search Galaxy mailing lists use the unified search at:
>   http://galaxyproject.org/search/mailinglists/
>
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/
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