Developing Tools

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Developing Tools

Saliya Ekanayake
Hi,

I am new to development with Galaxy and wonder if someone could kindly help me out with the following.

1.) A step-by-step guide on how to develop a tool 
2.) Are tools limited to simple functions that run on a single node?
3.) When Galaxy is run on cloud (with EC2) how does it utilize worker nodes? Is it such that steps in my workflow get load balanced into nodes?

Thank you,
Saliya

--
Saliya Ekanayake [hidden email] 
Cell 812-391-4914 Home 812-961-6383
http://saliya.org

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Re: Developing Tools

Björn Grüning
Hi Saliya,

the Galaxy documentation is a good starting point for your questions:

http://wiki.galaxyproject.org/
http://wiki.galaxyproject.org/Admin/Tools/Add%20Tool%20Tutorial

Also have a look at the Tool Shed:
http://wiki.galaxyproject.org/Admin/Tools/Add%20Tool%20Tutorial

You can search for Galaxy related topics with:
http://galaxyproject.org/search/web/

Hope that helps as starting point. Galaxy will take care for your
cluster integration.

Cheers,
Bjoern

> Hi,
>
>
> I am new to development with Galaxy and wonder if someone could kindly
> help me out with the following.
>
>
> 1.) A step-by-step guide on how to develop a tool
> 2.) Are tools limited to simple functions that run on a single node?
> 3.) When Galaxy is run on cloud (with EC2) how does it utilize worker
> nodes? Is it such that steps in my workflow get load balanced into
> nodes?
>
>
> Thank you,
> Saliya
>
>
> --
> Saliya Ekanayake [hidden email]
> Cell 812-391-4914 Home 812-961-6383
> http://saliya.org
> ___________________________________________________________
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
>   http://lists.bx.psu.edu/
>
> To search Galaxy mailing lists use the unified search at:
>   http://galaxyproject.org/search/mailinglists/



___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/
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Re: Developing Tools

Saliya Ekanayake
Thank you. The tool guide seems to have a good sample to begin with.

Saliya


On Thu, Jun 20, 2013 at 2:53 AM, Björn Grüning <[hidden email]> wrote:
Hi Saliya,

the Galaxy documentation is a good starting point for your questions:

http://wiki.galaxyproject.org/
http://wiki.galaxyproject.org/Admin/Tools/Add%20Tool%20Tutorial

Also have a look at the Tool Shed:
http://wiki.galaxyproject.org/Admin/Tools/Add%20Tool%20Tutorial

You can search for Galaxy related topics with:
http://galaxyproject.org/search/web/

Hope that helps as starting point. Galaxy will take care for your
cluster integration.

Cheers,
Bjoern

> Hi,
>
>
> I am new to development with Galaxy and wonder if someone could kindly
> help me out with the following.
>
>
> 1.) A step-by-step guide on how to develop a tool
> 2.) Are tools limited to simple functions that run on a single node?
> 3.) When Galaxy is run on cloud (with EC2) how does it utilize worker
> nodes? Is it such that steps in my workflow get load balanced into
> nodes?
>
>
> Thank you,
> Saliya
>
>
> --
> Saliya Ekanayake [hidden email]
> Cell 812-391-4914 Home 812-961-6383
> http://saliya.org
> ___________________________________________________________
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
>   http://lists.bx.psu.edu/
>
> To search Galaxy mailing lists use the unified search at:
>   http://galaxyproject.org/search/mailinglists/






--
Saliya Ekanayake [hidden email] 
Cell 812-391-4914 Home 812-961-6383
http://saliya.org

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/