GALAXY_DATA_INDEX_DIR problem

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GALAXY_DATA_INDEX_DIR problem

Lukasse, Pieter

Hi,

 

In the documentation page https://wiki.galaxyproject.org/Admin/Tools/ToolConfigSyntax it mentions that

 

the reserved parameter name GALAXY_DATA_INDEX_DIR - it points to the ~/tool-data directory.”

 

However, when we use this in a tool that is installed via toolshed we get a different interpretation of the variable: it seems to point to something like this at runtime:

./database/tmp/tmp-toolshed-gmfcrIr59Sq

 

 

Ideas?

 

 

Pieter Lukasse

Wageningen UR, Plant Research International

Department of Bioinformatics (Bioscience)

Wageningen Campus, Building 107, Droevendaalsesteeg 1, 6708 PB,
Wageningen, the Netherlands

T: +31-317481122;
M: +31-628189540;
skype: pieter.lukasse.wur

http://www.pri.wur.nl

 


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