Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9170)
Replies Last Post Views
Job is queued for imported dataset in library by Makis Ladoukakis
3
by Martin Čech
"--net None" option in Galaxy (Docker) by Brayet Jocelyn
3
by Brayet Jocelyn
Fwd: [Samtools-devel] Samtools/BCFtools/HTSlib 1.3 released by Peter Cock
2
by Peter Cock
samtools bam2fq --> samtools fastq / samtools fasta by Peter Cock
0
by Peter Cock
Apache proxy under Ubuntu by Mic
1
by Raymond Wan
GATK issues by Tiago Antao
0
by Tiago Antao
(no subject) by Justin Powell
2
by Justin Powell
How to define test with multiple inputs from one parameter by Ulf
0
by Ulf
Incorrect User Disk Usage by Ping
1
by Jennifer Hillman-Jac...
Visualization issue by Scott Szakonyi
1
by Jennifer Hillman-Jac...
workflow export name attribute changes by Jorrit Boekel
1
by Jennifer Hillman-Jac...
No handlers could be found for logger "galaxy.config" by Langhorst, Brad
0
by Langhorst, Brad
Two instances on different server with only one postgres database ? by Jean-Philippe Villem...
4
by Daniel Blankenberg
AssertionError: ID tag is required for a Display Application by ROBERT BROWN
2
by ROBERT BROWN
IOError kills collections by Alexander Vowinkel
3
by John Chilton-4
unexpanded macros by Langhorst, Brad
5
by John Chilton-4
Re: [ICS ACI Info] Galaxy Server Administration Inquiry by Von Kuster, Greg
1
by Griffin, Jimmy (NIH/...
How does one create a viewer for a new datatype to display a webpage if eyeball is clicked? by ROBERT BROWN
3
by Björn Grüning-3
gcc error during pixman-0.32.4 installation on Mac OS X 10.11 by Hans Rudolph
20
by Björn Grüning-3
Re: wolfpsort by Olivier CLAUDE
7
by Olivier CLAUDE
Publish tool with Python dependencies to the toolshed by Ulf
6
by Dooley, Damion
3 questions by Olivier CLAUDE
2
by Olivier CLAUDE
Galaxy job scheduler slows down, when too many jobs are in the queue by Hans-Rudolf Hotz
0
by Hans-Rudolf Hotz
Picard installation dependency issues by Scott Szakonyi
6
by Scott Szakonyi
December 2015 Galactic News by Dave Clements-2
0
by Dave Clements-2
Aberrant data allocation and SNP mapping problem by Felix Mayr
3
by Dannon Baker-2
Question about contributing a Visualization plugin to Galaxy by Greg Von Kuster
6
by Greg Von Kuster
Last day to submit your abstract! BIB-SCB: III Bioinformatics and Computational Biology by Dave Clements-2
1
by Dave Clements-2
Error installing tools from toolshed by Scott Szakonyi
8
by Scott Szakonyi
IUC Contribution Fest - Metagenomics Tools and Workflows by Björn Grüning-3
0
by Björn Grüning-3
Bx-python and numpy eggs by Jose Juan Almagro Ar...
7
by Björn Grüning-3
Potential Hackathon proposal: RADSeq by Tiago Antao
28
by Tiago Antao
RAD-Seq Hackathon: Doodle pool by Tiago Antao
1
by Tiago Antao
tool data_column param issue under workflow mode by FGiacomoni INRA
3
by Aysam Guerler
Unable to up Planemo against latest dev by Christian Brenninkme...
10
by Christian Brenninkme...
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