Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9183)
Replies Last Post Views
This job is waiting to run - Issue after Update to 15.10 by M_Enders
1
by John Chilton-4
how to access current user's apikey by ROBERT BROWN
8
by Carl Eberhard
LDAP auth_conf.xml and search-filter condition by Rémy Dernat
0
by Rémy Dernat
Happy new year! by Björn Grüning-3
6
by Hans-Rudolf Hotz
IPython and Rstudio are missing by Mic
13
by Mic
Tool Release Announcement: JBrowse-in-Galaxy v0.4 by Eric Rasche-2
2
by Eric Rasche-2
IE setup problem by Mic
15
by Mic
This job is waiting to run - Issue after Update to 15.10 by M_Enders
0
by M_Enders
How does one run Javascript or HTML as a tool? by ROBERT BROWN
11
by ROBERT BROWN
IE Apache Proxy config file by Mic
1
by Eric Rasche-2
INIT script for Ubuntu by Mic
3
by Dannon Baker-2
Rstudio and Ipython supported versions for IE by Mic
0
by Mic
GCC2016 Web Site is Up: Including registration rates, and full training schedule by Dave Clements-2
0
by Dave Clements-2
Job is queued for imported dataset in library by Makis Ladoukakis
3
by Martin Čech
"--net None" option in Galaxy (Docker) by Brayet Jocelyn
3
by Brayet Jocelyn
Fwd: [Samtools-devel] Samtools/BCFtools/HTSlib 1.3 released by Peter Cock
2
by Peter Cock
samtools bam2fq --> samtools fastq / samtools fasta by Peter Cock
0
by Peter Cock
Apache proxy under Ubuntu by Mic
1
by Raymond Wan
GATK issues by Tiago Antao
0
by Tiago Antao
(no subject) by Justin Powell
2
by Justin Powell
How to define test with multiple inputs from one parameter by Ulf
0
by Ulf
Incorrect User Disk Usage by Ping
1
by Jennifer Hillman-Jac...
Visualization issue by Scott Szakonyi
1
by Jennifer Hillman-Jac...
workflow export name attribute changes by Jorrit Boekel
1
by Jennifer Hillman-Jac...
No handlers could be found for logger "galaxy.config" by Langhorst, Brad
0
by Langhorst, Brad
Two instances on different server with only one postgres database ? by Jean-Philippe Villem...
4
by Daniel Blankenberg
AssertionError: ID tag is required for a Display Application by ROBERT BROWN
2
by ROBERT BROWN
IOError kills collections by Alexander Vowinkel
3
by John Chilton-4
unexpanded macros by Langhorst, Brad
5
by John Chilton-4
Re: [ICS ACI Info] Galaxy Server Administration Inquiry by Von Kuster, Greg
1
by Griffin, Jimmy (NIH/...
How does one create a viewer for a new datatype to display a webpage if eyeball is clicked? by ROBERT BROWN
3
by Björn Grüning-3
gcc error during pixman-0.32.4 installation on Mac OS X 10.11 by Hans Rudolph
20
by Björn Grüning-3
Re: wolfpsort by Olivier CLAUDE
7
by Olivier CLAUDE
Publish tool with Python dependencies to the toolshed by Ulf
6
by Dooley, Damion
3 questions by Olivier CLAUDE
2
by Olivier CLAUDE
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