Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9183)
Replies Last Post Views
OpenMS caused Error downloading from URL by Mic
3
by Mic
JBrowse failed to install by Mic
2
by Mic
Error in sh manage_db.sh -c ./config/galaxy.ini upgrade by ROBERT BROWN
0
by ROBERT BROWN
FASTQ Groomer tool by fernandez Edgar
7
by fernandez Edgar
Galaxy Url for Fasta and Bed index files by Asma Riyaz
0
by Asma Riyaz
package_xz_5_0_5 - Error downloading from URL: by Mic
0
by Mic
Login problem with Galaxy instance by Makis Ladoukakis
21
by Makis Ladoukakis
Trying to install GATK on up-to-date Galaxy install by Dooley, Damion
0
by Dooley, Damion
Planemo 0.19.0 testing tools that produce dataset collections by Von Kuster, Greg
2
by Von Kuster, Greg
installable revisions for repository suite definitions by Aaron Petkau
6
by Aaron Petkau
GCC2016 Training Topic Voting CLOSES THIS FRIDAY by Dave Clements-2
0
by Dave Clements-2
support for newer versions of Torque by Malcolm Tobias
1
by Malcolm Tobias
tool-shed delete problem by Kucukural, Alper
3
by Martin Čech
netcdf 4.3 error by Olivier CLAUDE
2
by Olivier CLAUDE
Developing package wrappers by Tiago Antao
5
by Björn Grüning-3
November Galactic News: New papers, events, jobs, servers, and more by Dave Clements-2
0
by Dave Clements-2
new to galaxy by Olivier CLAUDE
0
by Olivier CLAUDE
Good entry bugs/entry points to start developing for Galaxy by Damian Birchler
2
by Eric Rasche-2
Uploading files to Galaxy with nginx proxy server by McCully, Dwayne (NIH...
1
by McCully, Dwayne (NIH...
toolshed and proxy by Floreline TOUCHARD
0
by Floreline TOUCHARD
using Bioblend with external authentication by Hans-Rudolf Hotz
2
by Hans-Rudolf Hotz
Hey I got some problems using galaxy... could you help me?.. by 홍윤지
2
by Gildas Le Corguillé
new to galaxy by Olivier CLAUDE
3
by Marius van den Beek-...
URGENT HELP! by Ali Al-Shahib
2
by Ali Al-Shahib
Bismark installation dependencies error by Jose Juan Almagro Ar...
8
by Jose Juan Almagro Ar...
Opening Galaxy with a specified History Name -- how to convert the clear text history id to an encrypted id? by rbrown Brown
2
by John Chilton-4
Re: Hey, I got some problem using galaxy, If you have a time, I hope your help..!! by Greg Von Kuster
1
by Gildas Le Corguillé
Error in tool parameters when histories are exported/imported by Simon Gladman-2
0
by Simon Gladman-2
search paths for custom tools by Tony Schreiner
4
by Tony Schreiner
GCC2016 Training Topic Voting is Open by Dave Clements-2
0
by Dave Clements-2
HTML and download links by Sabrina rodriguez
1
by Marius van den Beek
Deleting / deprecating an empty Tool Shed repository? by Peter Cock
0
by Peter Cock
external authentication - empty REMOTE_USER by Floreline TOUCHARD
6
by Floreline TOUCHARD
issue with install_tool_shed_repositories.py by smcmahon67
0
by smcmahon67
Spaces in GenomeSpaces file URLs from genomespace_importer tool by Marco Ocana
5
by Peter Cock
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