Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9170)
Replies Last Post Views
Error when Installing package_galaxy_utils_1_0 by Leslie Herrera
2
by Sven E. Templer
need help badly by fernandez Edgar
7
by Keith Suderman
Galaxy Tools and Collections Remote Hackathon (Thursday and Friday) by John Chilton-4
1
by Björn Grüning-3
Picard sam2fastq tool can output file including both single and paired reads? by Dooley, Damion
0
by Dooley, Damion
Mothur count.seqs by Shane Sturrock
0
by Shane Sturrock
simplifying Galaxy interface to the max (zen-like) by Piotr Grabowski
3
by Piotr Grabowski
FastQC galaxy issue by Hakeem Almabrazi-2
5
by Hakeem Almabrazi-2
GCC2017 Needs a Host! by Dave Clements-2
0
by Dave Clements-2
Removing LWR Support from Galaxy by John Chilton-4
0
by John Chilton-4
Subtleties of <version_command> and escaping dollar signs by Peter Cock
3
by John Chilton-4
Opening Galaxy with a specified History Name by ROBERT BROWN
3
by John Chilton-4
Galaxy configuration by Clinton Chee
5
by Clinton Chee
Process stuck in unix 'T' State by Calvin Morrison
1
by John Chilton-4
Cloudman - using different worker instance types by David Kovalic
2
by David Kovalic
Adding categories to Main by Keith Suderman
9
by Keith Suderman
custom tool - accessing user's data in bash script by Piotr Grabowski
1
by Björn Grüning-3
LDAP and valid username by Edouard Hirchaud
0
by Edouard Hirchaud
Tool with multiple outputs. by Léo Biscassi
4
by Léo Biscassi
Fatal Error while uploading a File with special Characters by M_Enders
4
by M_Enders
Configuring Apache server with uwsgi by Makis Ladoukakis
0
by Makis Ladoukakis
galaxy.ini tool_dependency_dir change by Dooley, Damion
4
by Will Holtz
BUG: Collections and History export by Alexander Vowinkel
1
by John Chilton-4
Connection to PBS server XXX for state check failed by Zuzanna K. Filutowsk...
2
by Zuzanna K. Filutowsk...
Galaxy start problem by Junchen Diao
1
by John Chilton-4
discover_datasets by srodriguez
1
by John Chilton-4
planemo and tool dependencies by Steve Cassidy
9
by Christian Brenninkme...
Account Disabled by Teshome Dagne Muluge...
0
by Teshome Dagne Muluge...
SFTP configuration with ProFTPD by Jose Juan Almagro Ar...
2
by Jose Juan Almagro Ar...
loading with Auto detect and fastqsanger options issue! by Hakeem Almabrazi-2
3
by Martin Vickers [mjv0...
docker-galaxy image with custom tools as new container? by Piotr Grabowski
1
by Björn Grüning-3
Torque 5.0.1 pbs_python by michael buren
0
by michael buren
Mid 2015 Galaxy CloudMan release by Dave Clements-2
0
by Dave Clements-2
July 2015 Galaxy Release (v 15.07) by Martin Čech
0
by Martin Čech
LDAP Auto register - "username is None" by Martin Vickers [mjv0...
6
by Nicola Soranzo-2
ActiveDirectory issues with auto register functionality by Yves Gagnon
0
by Yves Gagnon
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