Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9183)
Replies Last Post Views
Connection to PBS server XXX for state check failed by Zuzanna K. Filutowsk...
2
by Zuzanna K. Filutowsk...
Galaxy start problem by Junchen Diao
1
by John Chilton-4
discover_datasets by srodriguez
1
by John Chilton-4
planemo and tool dependencies by Steve Cassidy
9
by Christian Brenninkme...
Account Disabled by Teshome Dagne Muluge...
0
by Teshome Dagne Muluge...
SFTP configuration with ProFTPD by Jose Juan Almagro Ar...
2
by Jose Juan Almagro Ar...
loading with Auto detect and fastqsanger options issue! by Hakeem Almabrazi-2
3
by Martin Vickers [mjv0...
docker-galaxy image with custom tools as new container? by Piotr Grabowski
1
by Björn Grüning-3
Torque 5.0.1 pbs_python by michael buren
0
by michael buren
Mid 2015 Galaxy CloudMan release by Dave Clements-2
0
by Dave Clements-2
July 2015 Galaxy Release (v 15.07) by Martin Čech
0
by Martin Čech
LDAP Auto register - "username is None" by Martin Vickers [mjv0...
6
by Nicola Soranzo-2
ActiveDirectory issues with auto register functionality by Yves Gagnon
0
by Yves Gagnon
discover_datasets by Sabrina Legoueix Rod...
0
by Sabrina Legoueix Rod...
Error in installing tool dependencies by Nuwan Goonasekera-2
0
by Nuwan Goonasekera-2
Turn your workflow into a tool? by Alexander Vowinkel
3
by Jennifer Hillman-Jac...
ProFTPd in CloudMan by Alexander Vowinkel
3
by Alexander Vowinkel
about galaxy by Dong Liu
2
by Martin Čech
PBS Torque 15007: No permission by Ben Archuleta
0
by Ben Archuleta
Wiki documentation for tool_dependencies.xml file by Peter Cock
5
by Björn Grüning-3
PBS Torque 15007: No permission by Ben Archuleta-2
0
by Ben Archuleta-2
Renaming pages on the Galaxy wiki by Peter Cock
1
by Nicola Soranzo-2
September 2015 Galactic News by Dave Clements-2
0
by Dave Clements-2
IUC Tools & Collections Hackathon by Björn Grüning-3
0
by Björn Grüning-3
Unable to run simple Docker tool by Mikel Egaña Arangure...
5
by Mikel Egaña Arangure...
Get dataset/API ids for a dataset by Asma Riyaz
12
by Asma Riyaz
login problems when using a proxy and serving at a subdirectory by Bernau, Christoph
3
by Bernau, Christoph
Rename output from a repeat by Ulf
2
by John Chilton-4
samtools dependency changes ? by Wolfgang Maier
3
by John Chilton-4
Galaxy and PBS/Torque Cluster by Ryan Johnson
1
by John Chilton-4
Change genome build for multiple files by Frederik Coppens
2
by Frederik Coppens
API for job and workflow input metadata by Marco Ocana
2
by Marco Ocana
Change in toolshed disallowing install of previous versions of tools? by Aaron Petkau
4
by Aaron Petkau
Automated training environments - was Re: 20 August GalaxyAdmins Meetup: Genomic Data by mark fernandes (IFR)
1
by Björn Grüning-3
20 August GalaxyAdmins Meetup: Genomic Data Management; Tool Installation Automation by Dave Clements-2
3
by Björn Grüning-3
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