Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9183)
Replies Last Post Views
Oct '14 and Jan'15 release, trouble installing tools from the toolshed, resetting metadata for installed repositories by Yves Gagnon
1
by Yves Gagnon
Unable to get data from UCSC by Anna Terry
7
by Anna Terry
Partial automation for generating those twisty R dependency tool shed installation sequences by Ross-2
7
by Ross-2
problem with launching Galaxy cloud by Gurova, Katerina
1
by Dannon Baker-2
Problem with Galaxy installation by FRITSCH Emilie - L. ...
2
by FRITSCH Emilie - L. ...
Web/Job scaling question by Josephine Palencia
1
by Nate Coraor (nate@bx...
Fasta Datatype Adjustments by marcoalbuquerque
1
by John Chilton-4
GalaxyAdmins is Back! by Dave Clements-2
1
by Dave Clements-2
Tool param type "library_data" by Dooley, Damion
5
by Dooley, Damion
galaxyp build for docker by Evan Bollig PhD
1
by Björn Grüning-3
Unable to connect galaxy server after upgrade to latest version by Ping
2
by Ping
GCC2015 Training Day Topic Voting is open. Please vote! by Dave Clements-2
0
by Dave Clements-2
Manually adding new tools from toolshed by ryang
4
by John Chilton-4
EOF error with tool by Francis, Warren
1
by John Chilton-4
FastQC wrapper not seeing files at gzipped by ryang
8
by John Chilton-4
Getting 'No space left on device' at testtoolshed by jeltje
1
by John Chilton-4
Display of file content in a combobox by christof.pietsch@kws...
1
by John Chilton-4
Create a package with binaries by AK
3
by John Chilton-4
new user : galaxy install error by Abhishek Pratap
1
by saketkc
Baltimore Area Galaxy Meetup @ Johns Hopkins, January 22 by Dave Clements-2
0
by Dave Clements-2
Configuring external user authentication by Waldron, Michael H
1
by Waldron, Michael H
Multiple select input error after update by Alexandre
3
by Nicola Soranzo-2
Egg distribution error by Ulf
2
by John Chilton-4
galaxy-central and nginx by Jorrit Boekel
2
by Jorrit Boekel
Data manager for liftOver by Anne Pajon-2
0
by Anne Pajon-2
Moving from mercurial to git by azab
2
by John Chilton-4
Galaxy security vulnerabilities and 2015.01.13 Galaxy Stable Release by Nate Coraor (nate@bx...
0
by Nate Coraor (nate@bx...
January 13, 2015 Galaxy Distribution by Jennifer Hillman-Jac...
0
by Jennifer Hillman-Jac...
Tool Development DELLY by marcoalbuquerque
2
by Peter Cock
Re: No API way to delete a galaxy data library folder? by Dooley, Damion
0
by Dooley, Damion
Re: Galaxy Bioblend option for importing dataset into a library? (Nicola Soranzo) by Dooley, Damion
0
by Dooley, Damion
Galaxy Bioblend option for importing dataset into a library? by Dooley, Damion
2
by Nicola Soranzo-2
How to test my functional tests? by jeltje
3
by jeltje
Mercurial is out of date for Toolshed by ryang
7
by ryang
cluster queue job id? by Anna Terry
3
by Hans-Rudolf Hotz
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