Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9183)
Replies Last Post Views
Is anyone using composite datatype uploads? by Aysam Guerler
3
by John Chilton-4
tool xml data_columns interface by Jorrit Boekel
1
by John Chilton-4
ymaj error in galaxy by pjdias0
0
by pjdias0
handler processes suddenly consuming all RAM by Langhorst, Brad
1
by Langhorst, Brad
rename output dataset in workflow - input dataset variable by galapah
7
by John Chilton-4
more control over the "docker" command by Dan Tenenbaum-2
4
by John Chilton-4
Some plugin for digital normalization by Cristian Alejandro R...
6
by Peter Cock
master_api_key currently doesn't benefit from a real admin's key?! by Dooley, Damion
4
by Dooley, Damion
Fw: Re: galaxy server file upload problem by 홍종희
2
by Dannon Baker-2
Re: galaxy-dev Digest, Vol 101, Issue 29 by Dooley, Damion
0
by Dooley, Damion
galaxy server file upload problem by 홍종희
2
by 홍종희
Local Galaxy Apache Config by Nicholas Kline
0
by Nicholas Kline
Problem to upload data to Galaxy when using pbed file format by tjkarlsson
1
by John Chilton-4
Public toolshed giving "internal server error" by Peter Briggs
7
by Peter Cock
how to use api to log in Galaxy? by xlwang
0
by xlwang
MarkupSafe egg missing? e.args[1].key != e.args[0].key by Peter Cock
9
by Peter Cock
Help with new PscanChIP test tool shed repository. by Federico Zambelli
0
by Federico Zambelli
Is release_2014.10.06 "official"? by Lance Parsons
1
by John Chilton-4
customize the Upload File tool form (version 1.1.4) by Christophe Antoniews...
6
by Christophe Antoniews...
Error in creating admin user during tool shed bootstrap by bgrande
5
by bgrande
Jobs stuck in "new" state - Data Library datasets to blame? by Lance Parsons
7
by Lance Parsons
SMALT Docker integration run unsteadily by shenwiyn
1
by John Chilton-4
Plugin for debug / replay and display parameters by Rémy Dernat
0
by Rémy Dernat
LAST CALL! Re: GMOD user talks at PAG by Scott Cain
0
by Scott Cain
Dataset collection generation from a tool by Aaron Petkau
3
by Aaron Petkau
Galaxy Data Sources and Dataset Collections by Aaron Petkau
1
by John Chilton-4
toolsheds down by Evan Bollig PhD
0
by Evan Bollig PhD
Repeats shown upside down on galaxy-central by Peter Cock
7
by Aysam Guerler
large drill down selection UI component? by Andrew Warren
1
by Daniel Blankenberg
Tool shed environment dependency - HOW TO do this? by Lukasse, Pieter
13
by Lukasse, Pieter
picard and package_picard_1_56_0 by Evan Bollig PhD
2
by Evan Bollig PhD
Galaxy Mailing Lists are moving by Nate Coraor (nate@bx...
0
by Nate Coraor (nate@bx...
Use of gzipped files in Galaxy Unit Tests by Peter Cock
2
by Peter Cock
GMOD user talks at PAG by Scott Cain
0
by Scott Cain
ulimit problems after update by Ido Tamir
2
by John Chilton-4
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