Galaxy Development List Archive

This forum is an archive for the mailing list galaxy-dev@lists.galaxyproject.org (more options) Messages posted here will be sent to this mailing list.
Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


Subscribe to Galaxy Dev
Manage your subscription
1 ... 47484950515253 ... 262
Topics (9170)
Replies Last Post Views
Public toolshed giving "internal server error" by Peter Briggs
7
by Peter Cock
how to use api to log in Galaxy? by xlwang
0
by xlwang
MarkupSafe egg missing? e.args[1].key != e.args[0].key by Peter Cock
9
by Peter Cock
Help with new PscanChIP test tool shed repository. by Federico Zambelli
0
by Federico Zambelli
Is release_2014.10.06 "official"? by Lance Parsons
1
by John Chilton-4
customize the Upload File tool form (version 1.1.4) by Christophe Antoniews...
6
by Christophe Antoniews...
Error in creating admin user during tool shed bootstrap by bgrande
5
by bgrande
Jobs stuck in "new" state - Data Library datasets to blame? by Lance Parsons
7
by Lance Parsons
SMALT Docker integration run unsteadily by shenwiyn
1
by John Chilton-4
Plugin for debug / replay and display parameters by Rémy Dernat
0
by Rémy Dernat
LAST CALL! Re: GMOD user talks at PAG by Scott Cain
0
by Scott Cain
Dataset collection generation from a tool by Aaron Petkau
3
by Aaron Petkau
Galaxy Data Sources and Dataset Collections by Aaron Petkau
1
by John Chilton-4
toolsheds down by Evan Bollig PhD
0
by Evan Bollig PhD
Repeats shown upside down on galaxy-central by Peter Cock
7
by Aysam Guerler
large drill down selection UI component? by Andrew Warren
1
by Daniel Blankenberg
Tool shed environment dependency - HOW TO do this? by Lukasse, Pieter
13
by Lukasse, Pieter
picard and package_picard_1_56_0 by Evan Bollig PhD
2
by Evan Bollig PhD
Galaxy Mailing Lists are moving by Nate Coraor (nate@bx...
0
by Nate Coraor (nate@bx...
Use of gzipped files in Galaxy Unit Tests by Peter Cock
2
by Peter Cock
GMOD user talks at PAG by Scott Cain
0
by Scott Cain
ulimit problems after update by Ido Tamir
2
by John Chilton-4
tools version (eg: cufflinks) and bowtie indices file by elchia
1
by Björn Grüning-3
bowtie2: no stderr output by elchia
2
by elchia
data_columns by Jorrit Boekel
2
by Jorrit Boekel
Galaxy Not Displacing History by Jeremy Liu
3
by Jeremy Liu
DecoRNAi error by Rossella Rispoli
0
by Rossella Rispoli
strange issue with .RData files by Lukasse, Pieter
6
by Ross-2
Integrating Docker-based tools within Galaxy failed by shenwiyn
2
by shenwiyn
Unable to connect two tools in workflow editor by David Kelly
2
by David Kelly
importing a large number of samples via a sample sheet by ryang
0
by ryang
Can existing SAM/BAM filter tools give me mapped/unmapped pairs? by Peter Cock
2
by Peter Cock
Galaxy's dependency on old samtools vs tools wrapping later versions? by Peter Cock
3
by Peter Cock
(no subject) by Dave Clements-2
0
by Dave Clements-2
job_working / tmp folders by Shrum, Donald C
2
by Shrum, Donald C
1 ... 47484950515253 ... 262