Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (8979)
Replies Last Post Views
galaxy user data on file system with limited file lifetime by Matthias Bernt
0
by Matthias Bernt
All Jobs Error Out by Yip, Miu ki
2
by Yip, Miu ki
View uploaded files by pieter coussement-2
2
by pieter coussement-2
Disk organization for Jetstream Galaxy instance by David Kovalic
2
by David Kovalic
Tool dependency installation on older Galaxy installations by Brian Claywell-2
1
by Björn Grüning-3
Newline characters for txt files by Lawrence, Cris W
1
by John Chilton-4
installation error on venv dependencies.xml by Linda Bakker
1
by John Chilton-4
Search Tool Shed by Matthias Bernt
3
by Martin Čech
Rg: Galaxy Version by Anamika Singh
5
by Haiqing Li
tool problems (data_manager_fetch_ncbi_taxonomy & ggplot2) by Matthias Bernt
0
by Matthias Bernt
March 2017 News of the Galaxy by Dave Clements-2
0
by Dave Clements-2
SAML Authentication by Keith Suderman
3
by Keith Suderman
Deploy on cloud by Stavros 0 Sachtouris
1
by Enis Afgan-3
Problem with installing tools using Conda by Ashok Varadharajan
6
by Marius van den Beek
2017 Galaxy Community Conference: Registration & Abstract Submission are open by Dave Clements-2
0
by Dave Clements-2
ansible-galaxy-tools and venv by Matthias Bernt
2
by Matthias Bernt
Fatal Error while uploading a File with special Characters by SAPET, Frederic
0
by SAPET, Frederic
Galaxy and Torque by Yip, Miu ki
1
by cganote@iu.edu
Execute command once job has completed by evan clark
2
by Peter Cock
Issue when using xsendfile with galaxy release_16.07 by SAPET, Frederic
5
by SAPET, Frederic
migratting to Galaxy new realease error by Mohamed Kassam
4
by Nicola Soranzo-2
The January 2017 (17.01) Galaxy release is out. Now with Conda 🐍 for everybody! by Jennifer Hillman-Jac...
2
by Tamir,Ido
Blast db permission by Mohamed Kassam
4
by SAPET, Frederic
nginx x-accel by Briand, Sheldon (NRC...
1
by Briand, Sheldon (NRC...
list of names, variables that cannot be used inside XML by Jochen
2
by Jochen
Problem with dataset_permissions and roles by Lemley, Rob
0
by Lemley, Rob
regarding tool dependencies by Nir Shachaf
2
by Martin Čech
Last stable galaxy Release 16.10 or 17.01 ? by NGS & Bioinformatics...
2
by NGS & Bioinformatics...
ImportError and Project life cycle by Matthias Bernt
7
by Matthias Bernt
GalaxyAdmins meetup starting soon by Enis Afgan-3
0
by Enis Afgan-3
Bad UID exception with pbs_python on galaxy 16_10 and torque 6.02 by Vandeweyer Geert
0
by Vandeweyer Geert
GalaxyAdmins online meetup: this Thursday by Enis Afgan-3
1
by Dave Clements-2
Fwd: Galaxy on the Amazon cloud by Jennifer Hillman-Jac...
0
by Jennifer Hillman-Jac...
Upgrade migration scripts by Matthias Bernt
1
by Martin Čech
GalaxyAdmins online meetup: call details by Enis Afgan-3
0
by Enis Afgan-3
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