Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9183)
Replies Last Post Views
Retrieving json files by saketkc
2
by saketkc
API for multi-file upload by burdettn
1
by John Chilton-4
Error with functional tests on cluster by Sandra Derozier
1
by John Chilton-4
testing the visualization plugins by Hans-Rudolf Hotz
7
by Hans-Rudolf Hotz
Problem Running TopHat2 by changk16
6
by changk16
September 2014 Galaxy News by Dave Clements-2
0
by Dave Clements-2
Grouping of tools inside of toolbox does not work by Björn Grüning-3
1
by John Chilton-4
refresh_on_change : is this a valid attribute? Any other ideas/options?? by Lukasse, Pieter
0
by Lukasse, Pieter
Multiple output datasets by Martin Christiansen
9
by Stef van Lieshout
Re: Cluster jobs running as real user by Linda Cham
0
by Linda Cham
proxy / ssl by Shrum, Donald C
0
by Shrum, Donald C
Developer Events in Europe this Fall: Swiss-German Galaxy Tour by Dave Clements-2
0
by Dave Clements-2
problems with database migration 119 -> 120 by Hans-Rudolf Hotz
4
by Nate Coraor (nate@bx...
Galaxy and object stores by Raknes Inge Alexande...
2
by John Chilton-4
ssl proxy by Shrum, Donald C
7
by Eric Rasche
How to build an application that uses a set of files? by georgeweingart
4
by georgeweingart
Re: Mira-Assembler: DOESN'T WORK ON GALAXY by Peter Cock
3
by Marija Atanaskovic
Database integrity error when installing new tools from toolshed by Michael Ta
2
by Michael Ta
Galaxy and HTTPS User-authentification by M_Enders
1
by Nate Coraor (nate@bx...
Problems downloading files via bioblend by Brad Zeitner
1
by John Chilton-4
Internal Server Error when trying to install a tool from the Tool shed by audrey michel
6
by audrey michel
bioblend run_workflow (no_wait?) by Evan Bollig PhD
3
by Dannon Baker-2
Problem uploading files to RNA-Rocket by David Salcines
1
by Dannon Baker-2
redirecting to unnamed history by Michael Mason
2
by Michael Mason
Problem selecting datasets with a specified datatype by georgeweingart
4
by georgeweingart
bug: API broken under remote_user by Eric Rasche
6
by Eric Rasche
Plans for Docker image generation in galaxy by Marius van den Beek
2
by Marius van den Beek
Upload file not working with new install by Iry Witham
8
by Iry Witham
Test run frequency on TestToolShed by Peter Cock
3
by saketkc
My last day as a core Galaxy Development Team member by Greg Von Kuster
0
by Greg Von Kuster
Re: Galaxy dont work on my Bio-Linux‏ by qiaoyan
0
by qiaoyan
Re: Galaxy dont work on my Bio-Linux by qiaoyan
1
by qiaoyan
August 11, 2014 Galaxy Distribution by Jennifer Jackson
1
by Jennifer Jackson
TypeError with 'dict' by Martin Christiansen
10
by John Chilton-4
unable to stob jobs by Michael Mason
2
by John Chilton-4
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