Galaxy Development List Archive

This forum is an archive for the mailing list galaxy-dev@lists.galaxyproject.org
Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (8886)
Replies Last Post Views
conda management of tools dependent on python3 by Wolfgang Maier
9
by Vincent Cahais
Compilation of package_bioconductor_limma_3_28_10 crash : source unavailable ! by Emmanuel Quemener
0
by Emmanuel Quemener
upload problem for http://deeptools.ie-freiburg.mpg.de by Robert Hansel-Hertsc...
0
by Robert Hansel-Hertsc...
Errors when building Galaxy RNA-Seq Docker Image by Stephen Kelly
1
by Björn Grüning-3
Last Call for GMOD talks at PAG by Scott Cain
0
by Scott Cain
galaxy - velvet devteam revision 08256557922f by fernandez Edgar
1
by fernandez Edgar
Installing ToolShed Tools into Galaxy via Browser Interface Exception Thrown by Yip, Miu ki
5
by Yip, Miu ki
<version_command> $__tool_directory__ not working by D K
0
by D K
Galaxy+Slurm (with elastic cluster) error: "Job output not returned from cluster" by Marco Tangaro
1
by Enis Afgan-3
IEs and fancy visualisations by Björn Grüning-3
0
by Björn Grüning-3
Compiling dependencies in galaxy yields error by evan clark
4
by evan clark
Local Galaxy Workflow Sharing by Rachel Bell
1
by John Chilton-4
November 2016 Galactic News by Dave Clements-2
0
by Dave Clements-2
Error for Picard CollectInsertSizeMetrics by Raphenya, Amogelang
0
by Raphenya, Amogelang
Job_id in a galaxy tool by Katherine Beaulieu
1
by John Chilton-4
Local galaxy samtools HISAT 2 issue by evan clark
1
by John Chilton-4
galaxy venv problem by Beginner TI
1
by Nicola Soranzo-2
Call for GMOD talks at PAG by Scott Cain
0
by Scott Cain
odose by Vos, Michiel
2
by Björn Grüning-3
Usegalaxy.org Data Rsync Connection refused by Georgios Nikolis
0
by Georgios Nikolis
Cannot start Galaxy DistributionNotFound: Paste by marcelo_t
1
by Nicola Soranzo-2
New Galaxy Arabic Community by Dave Clements-2
1
by Björn Grüning-3
Tool wrapper NotFound error by evan clark
1
by John Chilton-4
Error on chemfp version 1.1p1 installation by Léo Biscassi
0
by Léo Biscassi
Workflow Execution Files by Katherine Beaulieu
3
by Aysam Guerler
Galaxy Pulsar unable to access DRMAA so by Yip, Miu ki
0
by Yip, Miu ki
upload data error by Beginner TI
2
by Beginner TI
Tool needs a particular file extension by Steve Cassidy
5
by Gildas Le Corguillé
question about galaxy supported datastore by Beginner TI
0
by Beginner TI
Changing Tool Shed URL by Youssef GHORBAL
6
by Martin Čech
Data Library Import "Click this to start analyzing it." requires relogin by D K
2
by Martin Čech
Wrapper for the MISO programs by evan clark
0
by evan clark
user email info by Mohamed Kassam
1
by Marius van den Beek
Tool.xml : correct way to define an environment_variable ? by Pierre Lindenbaum
3
by Pierre Lindenbaum
Perl module problem with vcftools in conda + new tool by Peter van Heusden
0
by Peter van Heusden
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