Galaxy Development List Archive

This forum is an archive for the mailing list galaxy-dev@lists.galaxyproject.org (more options) Messages posted here will be sent to this mailing list.
Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


Subscribe to Galaxy Dev
Manage your subscription
1 ... 69707172737475 ... 262
Topics (9170)
Replies Last Post Views
migrate_tools error with latest release (hg update release_2014.02.10 ) by Geert Vandeweyer-4
5
by Dave Bouvier
Error installing VarScan from Toolshed by Graham Etherington
3
by Dave Bouvier
cap3 in galaxy by Jens
0
by Jens
a question regarding galaxy 'workflow' by Rui Wang
0
by Rui Wang
Import Datasets to History problem by Pandorin
1
by cjav
Twill comparisons ignore GALAXY_TEST_NO_CLEANUP by Peter Cock
1
by Dave Bouvier
Feb 10, 2014 Galaxy Distribution & News Brief by Jennifer Jackson
0
by Jennifer Jackson
Shed_tools couldn't installed due to lack of proxy support. Change in lib/tool_shed/util/common_util.py solves the problem. by Luca Toldo
0
by Luca Toldo
Error introduced with Fastq Groomer by philippe
2
by John Chilton
running tools within tool by Ketan Maheshwari-2
7
by Peter Cock
SRA datatype by Todd Oakley
1
by Ross-2
Running Import History from File as local job by Graham Etherington
5
by John Chilton
Galaxy server user activity by Fenglou Mao
1
by Eric Rasche
mpileup -> ImportError: cannot import name stylesheet_link_tag by Adhemar
1
by Dannon Baker-2
sysadmin help by Shrum, Donald C
1
by Eric Rasche
Galaxy in there server by Bishwo Adhikari
2
by Eric Rasche
Put Galaxy behind an index.php page by Jingchao
1
by Eric Rasche
SIFT error on local server by Alan WiIliams
0
by Alan WiIliams
Launching External functional tests fails with: local variable 'galaxy_test_proxy_port' referenced before assignment by Renato Alves
3
by John Chilton
Suitability of Galaxy Instance for Project by Alecia Korkowski
0
by Alecia Korkowski
html output with javascript by Laure QUINTRIC
2
by Laure QUINTRIC
Tool dependencies - how to reinstall manually via command line by Renato Alves
0
by Renato Alves
IGV display_application configuration failed with require_login=TRUE by navratil
3
by navratil
Several jobs stalled in the queue: Job runner assigned but no external ID recorded by Derrick LIN
1
by Derrick LIN
igv integration by Langhorst, Brad
0
by Langhorst, Brad
Cluster nodes without NFS access to galaxy-dev. by Luca Toldo
1
by John Chilton
Running tools from within a tool by Ketan Maheshwari
0
by Ketan Maheshwari
Upload via FTP - Assertion Error on Change ownership of working dictory by Adam Brenner
3
by Adam Brenner
tools fails only in workflow by Christian Hundsrucke...
0
by Christian Hundsrucke...
Cheetah code issue by Ketan Maheshwari
2
by Ketan Maheshwari
How to install tool-shed behind proxy with authentication ? by Luca Toldo
3
by Luca Toldo
Indexes separator in tool by Bossers, Alex
0
by Bossers, Alex
local galaxy instance can't recognize file format!! by JU HUCK LEE
0
by JU HUCK LEE
Remote User Logout by nephantes
7
by Dave Clements-2
February 2014 Galaxy Update Newsletter by Dave Clements-2
0
by Dave Clements-2
1 ... 69707172737475 ... 262