Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9183)
Replies Last Post Views
The latest galaxy-dist run.sh failed by zong-pei.han
1
by zong-pei.han
hmmer install by khmiga
4
by khmiga
FTP Problem: Users cannot see their uploads files. by mmonsoo
17
by John Chilton
Announcing the Galaxy Community Log Board by Dave Clements-2
0
by Dave Clements-2
ClustalW by Sheri Zada
1
by Jennifer Jackson
phyloviz: save visualization error by khmiga
2
by Carl Eberhard
cloudman FTP upload: localhost? by mattarno
0
by mattarno
IDR-plot by Federico Zambelli
2
by Federico Zambelli
Problem installing tool_ Galaxy local by Valeria Parreira Pin...
9
by Valeria Parreira Pin...
error with unicode output by David Hoover
13
by John Chilton
Per-tool overrides for environment variables (non-tool shed)? by Dan Sullivan
0
by Dan Sullivan
RFC: GALAXY_MEMORY similar to GALAXY_SLOTS by Björn Grüning-3
1
by John Chilton
Interacting with output views in Galaxy by Steve Taylor
2
by Steve Taylor
Installing DeepTools on Cloudman 2.0 by Mohammad Heydarian
4
by Mohammad Heydarian
how to viz. gff file on fasta file from history in trackster? by Eric Rasche
0
by Eric Rasche
Announcing the Galaxy Deployment Catalog! by Dave Clements-2
0
by Dave Clements-2
tiff files in galaxy by Robert Baertsch
4
by Dannon Baker-2
hierarchical ObjectStore - noatime by Björn Grüning-3
3
by Björn Grüning
Re: [Galaxy-ZBIT] Help needed in Galaxy Uploading files. by El-Sayed Hegazy
0
by El-Sayed Hegazy
survey by philippe
2
by Hans-Rudolf Hotz
Subclassing downloadable archive file for composite datatypes by Peter Cock
7
by Peter Cock
job_conf.xml output_size limit by Sarah Diehl-2
0
by Sarah Diehl-2
December 2013 Galaxy Update by Dave Clements-2
0
by Dave Clements-2
Error running Clustalw and HyPhy on Cloudman by khmiga
10
by Ross-2
Active Directory by Alexander Kurze-2
1
by Stewart, Andrew
Patch for lib/galaxy/webapps/galaxy/api/provenance.py for optional dataset parameters by Jim Johnson-3
1
by John Chilton
Tool never get properly installed into Galaxy by Stephanie LE GRAS
2
by Stephanie LE GRAS
Missing test results on (Test) Tool Shed by Peter Cock
77
by Peter Cock
character set encoding metadata by Robert Baertsch
1
by John Chilton
Re: galaxy-dev Digest, Vol 89, Issue 32 by Dooley, Damion
0
by Dooley, Damion
Active Directory by Alexander Kurze
0
by Alexander Kurze
Active Directory by Alexander Kurze-2
0
by Alexander Kurze-2
Uploading files from password protected URL's by Nicolas Cybulski
0
by Nicolas Cybulski
Add a tool to galaxy by sun liang
0
by sun liang
Dynamic tool loading by Mikel Egaña Arangure...
2
by Mikel Egaña Arangure...
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