Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9170)
Replies Last Post Views
Pasted text in upload.py by dgorelik
0
by dgorelik
Trackster set display mode - Output looks all the same by Linda Cham
2
by Linda Cham
Recently Used Histories by Jonathan Strickland
0
by Jonathan Strickland
problems with exporting or importing data by Edlund, Anna
1
by Jeremy Goecks
minor SQLAlchemy PostgreSQL issue by Richard Burhans
1
by Dannon Baker-2
Failed runtime validation of To by Sameer Dixit
2
by James Taylor
Installing Galaxy EC2 by dgorelik
3
by dgorelik
Toolshed tool doesn't exist error after installation from toolshed by Simon Gladman
1
by Greg Von Kuster
Galaxy job will stay in waiting under DRMAA runner until manually trigger a command line submission by Linda Cham
0
by Linda Cham
Failing test in tool shed not shown by Björn Grüning
3
by Björn Grüning
How to Install Bowtie? by Nicholas Kline
0
by Nicholas Kline
Tool shed tool error by SHAUN WEBB
1
by Nate Coraor (nate@bx...
a question about "profile annotations" tool by Shu-Yi Su
0
by Shu-Yi Su
Cann't restart server after updating to the latest version by karenchait
1
by Joachim Jacob
IVG display error / local instance of Galaxy by Sarah Maman-2
0
by Sarah Maman-2
how to access galaxy model in the tool wrapper by BingXin Lu
0
by BingXin Lu
disk space usage by Katie Kathrein
1
by Jennifer Jackson
Error in getting updates from server by Mather Ali Khan
1
by Jennifer Jackson
Can I use javascript in the xml to select a date on a calender? by Ramon Tiburski
2
by Ramon Tiburski
bug in galaxy-central security by Robert Baertsch
6
by Dannon Baker-2
Basic setup question by Malcolm Tobias
2
by Malcolm Tobias
galaxy cloud ftp by Mallon, Eamonn B. (D...
0
by Mallon, Eamonn B. (D...
Problems running functional tests by iracooke
8
by Björn Grüning
Bypassing the proxy server when using the API, without breaking the automatic update of the history in the web interface by thondeboer
3
by thondeboer
local install problem by alk224
3
by Dannon Baker-2
Issue with set_user_disk_usage.py and Postgres 8.x by Lance Parsons
4
by Lance Parsons
Installation Instructions slightly wrong by Michael E. Cotterell
1
by Nate Coraor (nate@bx...
nested repositories and tools by Simon Gladman
1
by Björn Grüning
none mapping is not currently available! by Sameer Dixit
1
by Sameer Dixit
Galaxy Config Questions by Nicholas Kline
1
by Adam Brenner
error after pulling latest updates by Branden Timm-2
2
by Nate Coraor (nate@bx...
Tool Visibility by Michael E. Cotterell
10
by Michael E. Cotterell
Re: Creating multiple datasets in a libset by burdettn
7
by Hakeem Almabrazi
Error / import rpy module by Sarah Maman-2
7
by Hans-Rudolf Hotz
Creating workflow which includes Multifile upload by alexbk66
4
by John Chilton
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