Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9183)
Replies Last Post Views
Download histories by Doan, Ryan
1
by Jeremy Goecks
Tool menu customization :: Card #727 by Björn Grüning
1
by Björn Grüning
moving galaxy published pages by Vipin TS
1
by Dannon Baker-2
Re: [galaxy-user] How do I add Ray to Galaxy Central in the tool shed ? by Sébastien Boisvert
1
by Jennifer Jackson
Galaxy wrappers for NCBI BLAST+ BoF by Peter Cock
0
by Peter Cock
blastn: Error: NCBI C++ Exception by Thomas
5
by Peter Cock
Question about the UCSC external viewer by Malcolm Tobias
0
by Malcolm Tobias
database upgrade crashes after upgrade to the June 3, 2013 Galaxy release by Christophe Antoniews...
3
by Dannon Baker-2
Galaxy Security Notification by Nate Coraor (nate@bx...
0
by Nate Coraor (nate@bx...
Toolshed bug related to readme files by Lance Parsons
4
by Greg Von Kuster
Galaxy on Cluster - how to set -a flag with username by greg-2
5
by greg-2
Recently Used Histories by Jonathan Strickland-...
1
by Jeremy Goecks
Trackster error: not able to find the chrom len file by Joachim Jacob
2
by Jeremy Goecks
Pasted text in upload.py by dgorelik
0
by dgorelik
Trackster set display mode - Output looks all the same by Linda Cham
2
by Linda Cham
Recently Used Histories by Jonathan Strickland
0
by Jonathan Strickland
problems with exporting or importing data by Edlund, Anna
1
by Jeremy Goecks
minor SQLAlchemy PostgreSQL issue by Richard Burhans
1
by Dannon Baker-2
Failed runtime validation of To by Sameer Dixit
2
by James Taylor
Installing Galaxy EC2 by dgorelik
3
by dgorelik
Toolshed tool doesn't exist error after installation from toolshed by Simon Gladman
1
by Greg Von Kuster
Galaxy job will stay in waiting under DRMAA runner until manually trigger a command line submission by Linda Cham
0
by Linda Cham
Failing test in tool shed not shown by Björn Grüning
3
by Björn Grüning
How to Install Bowtie? by Nicholas Kline
0
by Nicholas Kline
Tool shed tool error by SHAUN WEBB
1
by Nate Coraor (nate@bx...
a question about "profile annotations" tool by Shu-Yi Su
0
by Shu-Yi Su
Cann't restart server after updating to the latest version by karenchait
1
by Joachim Jacob
IVG display error / local instance of Galaxy by Sarah Maman-2
0
by Sarah Maman-2
how to access galaxy model in the tool wrapper by BingXin Lu
0
by BingXin Lu
disk space usage by Katie Kathrein
1
by Jennifer Jackson
Error in getting updates from server by Mather Ali Khan
1
by Jennifer Jackson
Can I use javascript in the xml to select a date on a calender? by Ramon Tiburski
2
by Ramon Tiburski
bug in galaxy-central security by Robert Baertsch
6
by Dannon Baker-2
Basic setup question by Malcolm Tobias
2
by Malcolm Tobias
galaxy cloud ftp by Mallon, Eamonn B. (D...
0
by Mallon, Eamonn B. (D...
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