Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9183)
Replies Last Post Views
odose by Vos, Michiel
2
by Björn Grüning-3
Usegalaxy.org Data Rsync Connection refused by Georgios Nikolis
0
by Georgios Nikolis
Cannot start Galaxy DistributionNotFound: Paste by marcelo_t
1
by Nicola Soranzo-2
New Galaxy Arabic Community by Dave Clements-2
1
by Björn Grüning-3
Tool wrapper NotFound error by evan clark
1
by John Chilton-4
Error on chemfp version 1.1p1 installation by Léo Biscassi
0
by Léo Biscassi
Workflow Execution Files by Katherine Beaulieu
3
by Aysam Guerler
Galaxy Pulsar unable to access DRMAA so by Yip, Miu ki
0
by Yip, Miu ki
upload data error by Rui Wang
2
by Rui Wang
Tool needs a particular file extension by Steve Cassidy
5
by Gildas Le Corguillé
question about galaxy supported datastore by Rui Wang
0
by Rui Wang
Changing Tool Shed URL by Youssef GHORBAL
6
by Martin Čech
Data Library Import "Click this to start analyzing it." requires relogin by D K
2
by Martin Čech
Wrapper for the MISO programs by evan clark
0
by evan clark
user email info by Mohamed Kassam
1
by Marius van den Beek
Tool.xml : correct way to define an environment_variable ? by Pierre Lindenbaum
3
by Pierre Lindenbaum
Perl module problem with vcftools in conda + new tool by Peter van Heusden
0
by Peter van Heusden
dynamic runner and embed_metadata_in_job by Laure QUINTRIC
0
by Laure QUINTRIC
KeyError: 'tool_panel_section' when installing a new tool by Pierre Lindenbaum
6
by Pierre Lindenbaum
Re: galaxy - prokka - tbl2asn by fernandez Edgar
1
by Peter Cock
Python ValueError: too many values to unpack by Matthias De Smet
3
by Peter Cock
Storing data in the user session by Steve Cassidy
18
by Steve Cassidy
Paste/Fetch data, indicate filename before download data (default = Pasted Entry) by Floreline TOUCHARD
2
by Floreline TOUCHARD
Galaxy Admin Training: November 7-11, Salt Lake City by Dave Clements-2
2
by Dave Clements-2
There is a bug in Lefse system by Bueno Silva,Carla Gr...
1
by Jennifer Hillman-Jac...
Local galaxy reading shed_tool_conf xml section in reverse by evan clark
0
by evan clark
troubles with galaxy database... by Alexis Dereeper
0
by Alexis Dereeper
Budgeting a production Galaxy instance by Vladimir Gritsenko
2
by Vladimir Gritsenko
Help wanted: setting up a production server by Steve Cassidy
2
by Björn Grüning-3
galaxy - bioperl - prokka by fernandez Edgar
1
by Nicola Soranzo-2
planemo test with <options from_data_table> by D K
7
by D K
Fwd: [mailinglist] Call for Submissions: Computer Demo Track at PAGXXV. by Dave Clements-2
0
by Dave Clements-2
Bioinformatics Trainings & Project Works by Mohammed Iftekhar
0
by Mohammed Iftekhar
Modifying Values in the Database by Katherine Beaulieu
2
by Katherine Beaulieu
R dependency problems with readline libraries by Nikolaos Tur
3
by Nikolaos Tur
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