Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9183)
Replies Last Post Views
Motif Alignment and Search Tool - MAST by KIRILL PANKOV
0
by KIRILL PANKOV
user login web page with welcome one by Nikolaos Tur
0
by Nikolaos Tur
showing progress on running tasks by ryang
4
by Raymond Wan
Can't stop uwsgi processes with supervisod by Marco Tangaro
0
by Marco Tangaro
Metadata access using tool config by Katherine Beaulieu
4
by Von Kuster, Greg
Python tool wrapper with multiple input and output files by Marco Tangaro
3
by Marius van den Beek
Auto detection of output format Galaxy custom tool by Katherine Beaulieu
11
by Peter Cock
Mapping requirements to conda recipe names (granularity?) by Peter van Heusden
1
by John Chilton-4
Using operations on multiple datasets by D K
2
by Von Kuster, Greg
Re: Building tool dependencies by Matthias De Smet
3
by Matthias De Smet
July Galactic News: GCC2016, GCC2017(!), Admin/Dev Trainings, GAMe 2017! by Dave Clements-2
0
by Dave Clements-2
Error while running Cuffdiff by Patel, Ravi Kanu
0
by Patel, Ravi Kanu
question using PICRUSt COG vs. KEGG by Ana Weil
0
by Ana Weil
Implementing iRODS with Galaxy by Yip, Miu ki
1
by Peter van Heusden
Docker for Mac by Rathert, Philipp, Dr...
8
by Lapointe, David
Doubts about Galaxy installation. by Álvaro Rios
4
by Björn Grüning-3
HTCondor tool runner configuration is not working properly on our Galaxy instance by Vipin TS
0
by Vipin TS
CloudMap_Hawaiian_Variant & missing tools on new Galaxy instance by Nikolaos Tur
2
by Wolfgang Maier
GCC2016 will be streamed by Dave Clements-2
1
by Tamir,Ido
Creating a test for a Tool Shed tool by Erika Gedvilaite
0
by Erika Gedvilaite
Toolshed tool HiFive error running by Bharath S
0
by Bharath S
tabular file displayed without tabs by ryang
13
by Dannon Baker-2
Ansible & Docker by mark fernandes (IFR)
0
by mark fernandes (IFR)
Infinite recursion on conda dependency manager by Peter van Heusden
4
by Rathert, Philipp, Dr...
History is not up-to-date by Rathert, Philipp, Dr...
6
by Björn Grüning-3
Building Galaxy Tool: cannot find 'is_of_type' by Nikolaos Tur
0
by Nikolaos Tur
flexbar v2.7 & required format extension by Nikolaos Tur
3
by Mina Bashir
GalaxyAdmins Meetup This Thursday by Dave Clements-2
1
by Hans-Rudolf Hotz
fail to install pulsar on windows machine by Jun Fan
0
by Jun Fan
how to get raw input from GUI by Rui Wang
3
by Dooley, Damion
cleanup datasets error by Rathert, Philipp, Dr...
8
by Björn Grüning-3
Re: Deploying custom genome in Galaxy for use with ANNOVAR (Peter Briggs) by David Kovalic
0
by David Kovalic
Compiler & OS questionnaire by Björn Grüning-3
0
by Björn Grüning-3
Trinity installation by Jose Juan Almagro Ar...
2
by Nicola Soranzo-2
Using session parameters in Galaxy tools by Amelia Ireland
1
by John Chilton-4
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