Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9170)
Replies Last Post Views
Implementing iRODS with Galaxy by Yip, Miu ki
1
by Peter van Heusden
Docker for Mac by Rathert, Philipp, Dr...
8
by Lapointe, David
Doubts about Galaxy installation. by Álvaro Rios
4
by Björn Grüning-3
HTCondor tool runner configuration is not working properly on our Galaxy instance by Vipin TS
0
by Vipin TS
CloudMap_Hawaiian_Variant & missing tools on new Galaxy instance by Nikolaos Tur
2
by Wolfgang Maier
GCC2016 will be streamed by Dave Clements-2
1
by Tamir,Ido
Creating a test for a Tool Shed tool by Erika Gedvilaite
0
by Erika Gedvilaite
Toolshed tool HiFive error running by Bharath S
0
by Bharath S
tabular file displayed without tabs by ryang
13
by Dannon Baker-2
Ansible & Docker by mark fernandes (IFR)
0
by mark fernandes (IFR)
Infinite recursion on conda dependency manager by Peter van Heusden
4
by Rathert, Philipp, Dr...
History is not up-to-date by Rathert, Philipp, Dr...
6
by Björn Grüning-3
Building Galaxy Tool: cannot find 'is_of_type' by Nikolaos Tur
0
by Nikolaos Tur
flexbar v2.7 & required format extension by Nikolaos Tur
3
by Mina Bashir
GalaxyAdmins Meetup This Thursday by Dave Clements-2
1
by Hans-Rudolf Hotz
fail to install pulsar on windows machine by Jun Fan
0
by Jun Fan
how to get raw input from GUI by Rui Wang
3
by Dooley, Damion
cleanup datasets error by Rathert, Philipp, Dr...
8
by Björn Grüning-3
Re: Deploying custom genome in Galaxy for use with ANNOVAR (Peter Briggs) by David Kovalic
0
by David Kovalic
Compiler & OS questionnaire by Björn Grüning-3
0
by Björn Grüning-3
Trinity installation by Jose Juan Almagro Ar...
2
by Nicola Soranzo-2
Using session parameters in Galaxy tools by Amelia Ireland
1
by John Chilton-4
Xenopus genome by Kurtenbach, Stefan
1
by Christian Brenninkme...
How to get the encoded ID from the HistoryDatasetAssociation? by Malcolm Tobias
2
by Malcolm Tobias
Any way to prime the value of a tool text field parameter dynamically? by Dooley, Damion
0
by Dooley, Damion
not sure what I can do about this... by fernandez Edgar
22
by fernandez Edgar
How to replace 'BioMart Central server' in the "Get Data" tools ? by Hans-Rudolf Hotz
5
by Martin Čech
Deploying custom genome in Galaxy for use with ANNOVAR by David Kovalic
1
by Peter Briggs
Error installing cummeRbund tool by Raymond Wan
3
by Raymond Wan
Auto-registration and database session issue by Durdevic, Marija
0
by Durdevic, Marija
setting metadata externally failed for HistoryDatasetAssociation by Anthony Underwood
3
by Anthony Underwood
The state of the MOTHUR merge? by Peter van Heusden
2
by Peter van Heusden
Re: LDAP authentication by mark fernandes (IFR)
0
by mark fernandes (IFR)
atlas 3.10 IUC error by Olivier CLAUDE
8
by Ulf
LDAP authentification by Durdevic, Marija
11
by Durdevic, Marija
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