Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9170)
Replies Last Post Views
June Galaxy News: Register for GCC2016 by June 4, new papers, openings, directories, ... by Dave Clements-2
0
by Dave Clements-2
Deeptools installation fails because of missing python module(setuptools) by Tobias Zimmermann
1
by Björn Grüning-3
Intallation of deeptools fails by Tobias Zimmermann
0
by Tobias Zimmermann
GCC2016: Register by this Saturday; Posters & Demos posted by Dave Clements-2
0
by Dave Clements-2
Bug Found: 2 tabs in browser open to different histories confuses tools by ryang
2
by Eric Rasche-2
Problem running bwa-mem by C. Ch.
0
by C. Ch.
SFTP settings by Durdevic, Marija
0
by Durdevic, Marija
PLINK 1.90 wrapper by Jochen
1
by Björn Grüning-3
Error in Deleting datasets by nazeer
0
by nazeer
Problems using LDAP authentification by Fahrenholz, Jan-Niko...
0
by Fahrenholz, Jan-Niko...
Unsorted BAM file --> Galaxy crash? by Raymond Wan
8
by Raymond Wan
Question: How to limit the number of dispatched jobs in Galaxy? by georgeweingart
1
by Dannon Baker-2
setting up a local galaxy instance - need sftp help by Jessica Grant
0
by Jessica Grant
Current history via the REST API (or blend4j) by Keith Suderman
6
by Carl Eberhard
sftp over proftpd and postgresql by Durdevic Marija
0
by Durdevic Marija
wheels.galaxyproject.org by Patrice Dehais
1
by Nicola Soranzo-2
It 's possible to purge deleted datasets with last galaxy code ? by sarah Maman
2
by Nicola Soranzo-2
STACKS error by Raphenya, Amogelang
5
by Ralf Weber
Refresh of screens in Galaxy Docker environment by georgeweingart
6
by By "Nate St. Germain...
galaxy does not get kill signal from drmaa (sge6) by Nick
1
by John Chilton-4
Galaxy Interactive Environments: node 0.10.X - 0.11.X vintage necessary? by Tamir,Ido
1
by Björn Grüning-3
Hits2 2.0.3 missing environment by Nick
0
by Nick
Installing a Jupyter Kernel by Keith Suderman
4
by Keith Suderman
Problem upgrading by Scott Szakonyi
4
by Will Holtz
Error when executing cleanup scripts by Scott Szakonyi
2
by Scott Szakonyi
tool error on TopHat test during metadata manipulations by Nick
0
by Nick
Update on Qiime in Galaxy? by Oksana Korol
2
by Oksana Korol
The Galaxy release 16.04 is out !!! by Jennifer Hillman-Jac...
0
by Jennifer Hillman-Jac...
Removing stale references from a history by Scott Szakonyi
2
by Scott Szakonyi
LDAP not working release 16_01 by Mohamed Kassam
3
by Mohamed Kassam
Ordering dropdown Database/Build by Scott Szakonyi
0
by Scott Szakonyi
galaxy.masthead.js change by Mohamed Kassam
3
by Dannon Baker-2
Any tool that uses Composite Datatypes by Ziphozakhe Mashologu
1
by Björn Grüning-3
GCC2016 Deadlines this Friday & Conference schedule by Dave Clements-2
0
by Dave Clements-2
Cufflinks version by Gaye Saginc
0
by Gaye Saginc
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