Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9170)
Replies Last Post Views
Allow users to see the job queue? by Raymond Wan
2
by Raymond Wan
Data removal after ftp import. by Zuzanna K. Filutowsk...
2
by John Chilton-4
Tool shed tools, manual dep installation by David Trudgian
9
by Nicola Soranzo-2
tool shed bug on uploading incorrect files by Christian Brenninkme...
0
by Christian Brenninkme...
Planemo test with SGE by D K
2
by D K
init scripts version 16.01 by Eric Kuyt
6
by Peter Cock
Re: probleme tool galaxy by navratil
1
by Curtis Hendrickeduso...
2016 Galaxy Community Conference: June 25-29, Bloomington, Indiana by Dave Clements-2
2
by Dave Clements-2
"\${GALAXY_SLOTS:-4}" usage help by richjp
3
by Nate Coraor (nate@bx...
Problem with LDAP authentication by Scott Szakonyi
2
by Scott Szakonyi
File_path setting not working by Scott Szakonyi
1
by Nicola Soranzo-2
dbkeys_list.yaml by William Ge
0
by William Ge
Galaxy Bare/Core and custom upload tool by Keith Suderman
9
by Björn Grüning-3
(no subject) by Jager, Victor de
1
by Nate Coraor (nate@bx...
MySQL & ToolShed installs: 'latin-1' codec can't encode character by Peter Cock
1
by Peter Cock
Re: [galaxy-bugs] Galaxy tool error report from etiennewalex@yahoo.fr (megablast_wrapper) by Jennifer Hillman-Jac...
0
by Jennifer Hillman-Jac...
About Local Galaxy Tool Problem by Ferhat Güzel
0
by Ferhat Güzel
IUC Hackathon - Conda dependencies by Rémi MARENCO
0
by Rémi MARENCO
Sandbox repository item says "This revision can be installed: False by ROBERT BROWN
1
by Nicola Soranzo-2
Problem on postgress database by jarod_v6@libero.it
0
by jarod_v6@libero.it
Galactic News! April Edition: GCC2016, DevOps, Hacks, events, papers, jobs, servers, hub entries, releases, tools by Dave Clements-2
0
by Dave Clements-2
Re: Toolshed Question, In reference to https://toolshed.g2.bx.psu.edu/view/youngkim/ezbamqc/caed0168f704 by Peter Cock
0
by Peter Cock
file transference between different galaxy servers... by Danilo Ceschin
2
by Jennifer Hillman-Jac...
Warning: Incorrect datetime value in Galaxy 16.01 by SAPET, Frederic
2
by SAPET, Frederic
Tool Visibility feature by SAPET, Frederic
3
by SAPET, Frederic
If you need to use PBS Pro with Galaxy 16.01. by SAPET, Frederic
0
by SAPET, Frederic
Request help to configure local galaxy in Git by Manonanthini Shanmug...
1
by Martin Čech
Troubleshooting BAM file upload issues by Amelia Ireland
10
by Daniel Blankenberg
package_bowtie_2_2_6 error by Changyu Fan
0
by Changyu Fan
Galaxy CloudMan with Galaxy 16.01 by Enis Afgan-3
0
by Enis Afgan-3
perl version 5.18.1 repository error by Rathert, Philipp, Dr...
5
by Rathert, Philipp, Dr...
Python 2.7 vs 2.6 for galaxy after 16.01 by D K
7
by Sebastian Schaaf
Data set too large by Tiara Smith
1
by Jennifer Hillman-Jac...
automatic adding of a tab in a fastq header by Fabien Mareuil
9
by Fabien Mareuil
Numpy 1.9 installation errors by Dewell, Scott
0
by Dewell, Scott
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