Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9066)
Replies Last Post Views
[hg] galaxy 2367: Two fixes: add type checking for id when delet... by Greg Von Kuster
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by Greg Von Kuster
[hg] galaxy 2366: Deleting the cleanup_dataset migration script ... by Greg Von Kuster
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by Greg Von Kuster
[hg] galaxy 2365: Add ability for admins to delete and undelete ... by Greg Von Kuster
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by Greg Von Kuster
Not-So-Running Jobs by Assaf Gordon
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by Nate Coraor (nate@bx...
Re: Cluster: job to User identification by Nate Coraor (nate@bx...
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by Nate Coraor (nate@bx...
New tool for Galaxy: column normalizer by Assaf Gordon
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by Assaf Gordon
[hg] galaxy 2364: Fix for uploading binary files into a library. by Greg Von Kuster
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by Greg Von Kuster
[hg] galaxy 2363: Fixes for native Leopard Python eggs by Nate Coraor (nate@bx...
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by Nate Coraor (nate@bx...
[hg] galaxy 2362: Clean up (unify) workflow sharing UI a bit by Nate Coraor (nate@bx...
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by Nate Coraor (nate@bx...
[hg] galaxy 2361: Fixes for copying library permissions, do not ... by Greg Von Kuster
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by Greg Von Kuster
[hg] galaxy 2360: Set users to external when admin created and u... by Nate Coraor (nate@bx...
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by Nate Coraor (nate@bx...
Libraries by SHAUN WEBB
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by Von Kuster, Greg
[hg] galaxy 2359: Bug fixed in linear regression tool, and new o... by gua110
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by gua110
[hg] galaxy 2358: lazyload Job properties when tracking jobs in ... by Nate Coraor (nate@bx...
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by Nate Coraor (nate@bx...
[hg] galaxy 2356: Some more adjustremnt for safari and new images by Greg Von Kuster
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by Greg Von Kuster
[hg] galaxy 2357: Add new migration script that creates missing ... by Greg Von Kuster
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by Greg Von Kuster
[hg] galaxy 2355: Fixed finf_diag_hits plus a ttypo correction by Greg Von Kuster
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by Greg Von Kuster
[hg] galaxy 2354: Fix for tool parameters - objects should now b... by Greg Von Kuster
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by Greg Von Kuster
[hg] galaxy 2353: New welcome per james style but with images in... by Nate Coraor (nate@bx...
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by Nate Coraor (nate@bx...
[hg] galaxy 2351: Remove beta message from workflow views by Nate Coraor (nate@bx...
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by Nate Coraor (nate@bx...
[hg] galaxy 2352: Fix bug in DrillDownSelectToolParamter by Nate Coraor (nate@bx...
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by Nate Coraor (nate@bx...
[hg] galaxy 2350: Fix a bug in workflow sharing by Nate Coraor (nate@bx...
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by Nate Coraor (nate@bx...
[hg] galaxy 2349: Previous addition of check_newlines to sniff w... by Nate Coraor (nate@bx...
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by Nate Coraor (nate@bx...
[hg] galaxy 2348: Fix some inexplicable bugs in the security/lib... by Nate Coraor (nate@bx...
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by Nate Coraor (nate@bx...
Error while submitting a job to sge queue by Akash Mohan
2
by Akash Mohan
Major updates to Galaxy feature set by Nate Coraor (nate@bx...
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by Nate Coraor (nate@bx...
Tools with multiple output files in galaxy by svalbard colaco
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by svalbard colaco
[hg] galaxy 1747: Added a new option to specify minimum match va... by Greg Von Kuster
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by Greg Von Kuster
[hg] galaxy 1748: Apply i18n fixes from Takashi Hatakeyama and M... by Greg Von Kuster
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by Greg Von Kuster
[hg] galaxy 1746: Re-fix the default test port... by Greg Von Kuster
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by Greg Von Kuster
[hg] galaxy 1745: i18n fix for build_from_current_history.mako t... by Greg Von Kuster
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by Greg Von Kuster
[hg] galaxy 1744: merging from central by Greg Von Kuster
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by Greg Von Kuster
[hg] galaxy 1743: i18n fix: dataset.info should not be translate... by Greg Von Kuster
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by Greg Von Kuster
[hg] galaxy 1742: i18n fixes: uploading binary files now works a... by Greg Von Kuster
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by Greg Von Kuster
[hg] galaxy 1741: Fixes for i18n support - all charsets set to u... by Greg Von Kuster
0
by Greg Von Kuster
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