Galaxy Development List Archive

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Galaxy Project

Archive for the Galaxy-Dev mailing list. If you have a question about deploying, enhancing, tuning or adding to a Galaxy instance then this is a good place to find an answer.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy server makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.


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Topics (9170)
Replies Last Post Views
UnicodeDecodeError with 16.01 by Anthony Bretaudeau-2
5
by Dannon Baker-2
Galaxy 15.10 Jobs not running by ryang
3
by Nate Coraor (nate@bx...
switch to git by Briand, Sheldon (NRC...
1
by Nate Coraor (nate@bx...
trouble with python packages after galaxy update by Linda Bakker
3
by Nate Coraor (nate@bx...
Galaxy Conference by Scott Szakonyi
3
by Martin Čech-2
Python 2.7 six egg fetching issue by Yves Gagnon-2
2
by Yves Gagnon-2
Problems with planemo functional tests by Léo Biscassi
4
by Léo Biscassi
error loading files into galaxy by Hakeem Almabrazi
1
by Peter Cock
playbook download error by William Ge
2
by William Ge
nginx data upload request never reaches /api/tools by Preussner, Jens
2
by Preussner, Jens
workflows "show in menu" by default by Cameron Jack
1
by John Chilton-4
Galaxy on Azure by Alex Lenail
2
by Alex Lenail
Dependencies for sudo scripts/drmaa_external_runner.py ? by Peter Cock
4
by Peter Cock
Load tools without service interruption by Floreline TOUCHARD
2
by John Chilton-4
Docker tools by azab
2
by Björn Grüning-3
Fwd: BOSC 2016 Call for Abstracts by Peter Cock
0
by Peter Cock
Galaxy External Authentication and API access by Lance Parsons
1
by Hans-Rudolf Hotz
Alternative methods for external authentication by Amelia Ireland
1
by Eric Rasche-2
Missing modules after upgrade to 16.01 by C. Ch.
3
by Nate Coraor (nate@bx...
Python 2.6 Support by Dannon Baker-2
2
by Peter Cock
March 2016 Galaxy News: GCC2016 deadlines this month, GSOC 2016, RAD-Seq Hack … by Dave Clements-2
0
by Dave Clements-2
tmp directory by Raphenya, Amogelang
4
by Rémy Dernat
GATK problems with data manager by Scott Szakonyi
1
by Björn Grüning-3
novoalign in Galaxy by Peter van Heusden
0
by Peter van Heusden
Downgrade tool upload tool by Makis Ladoukakis
7
by Makis Ladoukakis
Lost prostgresql database by Raphenya, Amogelang
3
by Hans-Rudolf Hotz
packaging R scripts by Xianrong Wong
3
by Björn Grüning-3
Docker and alpine linux by Tiago Antao
3
by Björn Grüning-3
BED12 Data Format by Lance Parsons
5
by Lance Parsons
Galaxy Docker 16.01 released! by Björn Grüning-3
0
by Björn Grüning-3
GATK problems with data-manager files by Scott Szakonyi
0
by Scott Szakonyi
Difficulty uploading BAM files by Scott Szakonyi
5
by Scott Szakonyi
Issue with Using Bar by Harrison Thompson
1
by Jennifer Hillman-Jac...
samtools view tools by Christian Brenninkme...
1
by Björn Grüning-3
Seeking Job Metrics Clarity by Ziphozakhe Mashologu
2
by Ziphozakhe Mashologu
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