Installing Galaxy EC2

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Installing Galaxy EC2

dgorelik
Hello all,

I have a question: does anyone know if it is possible to install Galaxy on an EC2 instance as you would on a local machine, not using CloudMan, and then view it in the web browser by going to public_ip:8080? I have been trying and it has not been working for me.


Thanks so much!
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Re: Installing Galaxy EC2

Daniel Blankenberg
Hi Daniel,

This should work fine. You'll need to make sure that you have the host setting in your universe_wsgi.ini like:

host = 0.0.0.0

and that the port 8080 is open/accessible in the security group settings for the instance in AWS.


Thanks for using Galaxy,

Dan

On Jun 10, 2013, at 4:42 PM, Daniel Gorelik wrote:

Hello all,

I have a question: does anyone know if it is possible to install Galaxy on an EC2 instance as you would on a local machine, not using CloudMan, and then view it in the web browser by going to public_ip:8080? I have been trying and it has not been working for me.


Thanks so much!
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Re: Installing Galaxy EC2

Joachim Jacob
Hi Daniel,

Make also sure you use correct firewall settings ('security groups') in
EC2. They are described the Galaxy wiki
(http://wiki.galaxyproject.org/CloudMan/AWS/GettingStarted?highlight=%28security%29|%28group%29),
but there are some small differences with the setting applied by
CloudLaunch
(http://dev.list.galaxyproject.org/Cloudman-missing-security-rules-in-wiki-page-td4659826.html#a4659902)

Set by CloudLaunch (during my latest launch):
Ports   Protocol        Source  CloudMan
1-65535         tcp     sg-61ba790a
*1-65535         udp     sg-61ba790a *
*-1      icmp    sg-61ba790a *
20-21   tcp 0.0.0.0/0 <http://0.0.0.0/0>
22      tcp 0.0.0.0/0 <http://0.0.0.0/0>
80      tcp 0.0.0.0/0 <http://0.0.0.0/0>
30000-30100     tcp 0.0.0.0/0 <http://0.0.0.0/0>
42284   tcp 0.0.0.0/0 <http://0.0.0.0/0>


Cheers,
Joachim

Joachim Jacob
Contact details: http://www.bits.vib.be/index.php/about/80-team


On 06/10/2013 10:54 PM, Daniel Blankenberg wrote:

> Hi Daniel,
>
> This should work fine. You'll need to make sure that you have the host
> setting in your universe_wsgi.ini like:
>
> host = 0.0.0.0
>
> and that the port 8080 is open/accessible in the security group
> settings for the instance in AWS.
>
>
> Thanks for using Galaxy,
>
> Dan
>
> On Jun 10, 2013, at 4:42 PM, Daniel Gorelik wrote:
>
>> Hello all,
>>
>> I have a question: does anyone know if it is possible to install
>> Galaxy on an EC2 instance as you would on a local machine, not using
>> CloudMan, and then view it in the web browser by going to
>> public_ip:8080? I have been trying and it has not been working for me.
>>
>>
>> Thanks so much!
>> ___________________________________________________________
>> Please keep all replies on the list by using "reply all"
>> in your mail client.  To manage your subscriptions to this
>> and other Galaxy lists, please use the interface at:
>> http://lists.bx.psu.edu/
>>
>> To search Galaxy mailing lists use the unified search at:
>> http://galaxyproject.org/search/mailinglists/
>
>
>
> ___________________________________________________________
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
>    http://lists.bx.psu.edu/
>
> To search Galaxy mailing lists use the unified search at:
>    http://galaxyproject.org/search/mailinglists/

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Re: Installing Galaxy EC2

dgorelik
Hello,

Thanks all, but it it turns out my problem was that the line saying to use the 0.0.0.0 host was commented out.. That was stupid..

Thank you,
Daniel

On Jun 11, 2013, at 6:46 AM, Quang Trinh <[hidden email]> wrote:

Hi Dan and Joachim
  You can also try what my students put together, which is based on a config file and more simple.


Thanks,

Q





On Tue, Jun 11, 2013 at 3:30 AM, Joachim Jacob | VIB | <[hidden email]> wrote:
Hi Daniel,

Make also sure you use correct firewall settings ('security groups') in EC2. They are described the Galaxy wiki (http://wiki.galaxyproject.org/CloudMan/AWS/GettingStarted?highlight=%28security%29|%28group%29), but there are some small differences with the setting applied by CloudLaunch (http://dev.list.galaxyproject.org/Cloudman-missing-security-rules-in-wiki-page-td4659826.html#a4659902)

Set by CloudLaunch (during my latest launch):
Ports   Protocol        Source  CloudMan
1-65535         tcp     sg-61ba790a
*1-65535         udp     sg-61ba790a *
*-1      icmp    sg-61ba790a *
20-21   tcp 0.0.0.0/0 <http://0.0.0.0/0>
22      tcp 0.0.0.0/0 <http://0.0.0.0/0>
80      tcp 0.0.0.0/0 <http://0.0.0.0/0>
30000-30100     tcp 0.0.0.0/0 <http://0.0.0.0/0>
42284   tcp 0.0.0.0/0 <http://0.0.0.0/0>


Cheers,
Joachim

Joachim Jacob
Contact details: http://www.bits.vib.be/index.php/about/80-team


On 06/10/2013 10:54 PM, Daniel Blankenberg wrote:
Hi Daniel,

This should work fine. You'll need to make sure that you have the host setting in your universe_wsgi.ini like:

host = 0.0.0.0

and that the port 8080 is open/accessible in the security group settings for the instance in AWS.


Thanks for using Galaxy,

Dan

On Jun 10, 2013, at 4:42 PM, Daniel Gorelik wrote:

Hello all,

I have a question: does anyone know if it is possible to install Galaxy on an EC2 instance as you would on a local machine, not using CloudMan, and then view it in the web browser by going to public_ip:8080? I have been trying and it has not been working for me.


Thanks so much!
___________________________________________________________
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in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
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http://galaxyproject.org/search/mailinglists/



___________________________________________________________
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___________________________________________________________
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___________________________________________________________
Please keep all replies on the list by using "reply all"
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