Question: Problems on Running Functional Tests on an External Instance of Galaxy

classic Classic list List threaded Threaded
3 messages Options
Reply | Threaded
Open this post in threaded view
|

Question: Problems on Running Functional Tests on an External Instance of Galaxy

speillet

Hi,

I try to apply functional tests of tools against my instance of Galaxy. When I launch run_functional_tests.sh with the default behavior on the local machine for running the tests it works.
But when I try to run tests against an external instance deployed on http://138.102.22.90:8080 and configuring environment variables as:
GALAXY_TEST_EXTERNAL=1, GALAXY_TEST_HOST=138.102.22.90 and GALAXY_TEST_PORT=8080 and then launch run_functional_tests.sh,
 I have for answer the error:

$ export GALAXY_TEST_EXTERNAL=1 && export GALAXY_TEST_HOST=138.102.22.90 && export GALAXY_TEST_PORT=8080
$ ./run_functional_tests.sh

No handlers could be found for logger "functional_tests.py"

I use the Galaxy Distribution of June 2, 2014, and my python version is "Python 2.7.5". May I need to do another configurations in my instance fortesting tools on an external instance?

Thanks a lot,
Stéphane

INRA - Unité MIG (Mathématique, Informatique et Génome)
F-78352 Jouy-en-Josas
[hidden email]


___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/
Reply | Threaded
Open this post in threaded view
|

Re: Question: Problems on Running Functional Tests on an External Instance of Galaxy

John Chilton-4
Hello Stéphane,

  To the best of my knowledge this feature has been broken for several years.

-John

On Mon, Jul 7, 2014 at 8:51 AM,  <[hidden email]> wrote:

> Hi,
>
> I try to apply functional tests of tools against my instance of Galaxy. When
> I launch run_functional_tests.sh with the default behavior on the local
> machine for running the tests it works.
> But when I try to run tests against an external instance deployed on
> http://138.102.22.90:8080 and configuring environment variables as:
> GALAXY_TEST_EXTERNAL=1, GALAXY_TEST_HOST=138.102.22.90 and
> GALAXY_TEST_PORT=8080 and then launch run_functional_tests.sh,
>  I have for answer the error:
>
> $ export GALAXY_TEST_EXTERNAL=1 && export GALAXY_TEST_HOST=138.102.22.90 &&
> export GALAXY_TEST_PORT=8080
> $ ./run_functional_tests.sh
>
> No handlers could be found for logger "functional_tests.py"
>
> I use the Galaxy Distribution of June 2, 2014, and my python version is
> "Python 2.7.5". May I need to do another configurations in my instance
> fortesting tools on an external instance?
>
> Thanks a lot,
> Stéphane
>
> INRA - Unité MIG (Mathématique, Informatique et Génome)
> F-78352 Jouy-en-Josas
> [hidden email]
>
>
> ___________________________________________________________
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
>   http://lists.bx.psu.edu/
>
> To search Galaxy mailing lists use the unified search at:
>   http://galaxyproject.org/search/mailinglists/

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/
Reply | Threaded
Open this post in threaded view
|

Re: Question: Problems on Running Functional Tests on an External Instance of Galaxy

John Chilton-4
Opps sorry about that - I sent that last e-mail out before I meant to.
As I was saying - I believe that feature has been broken for years and
there is a Trello card to track progress on and vote for here:
https://trello.com/c/8K86l4Qk.

-John

On Mon, Jul 7, 2014 at 9:00 AM, John Chilton <[hidden email]> wrote:

> Hello Stéphane,
>
>   To the best of my knowledge this feature has been broken for several years.
>
> -John
>
> On Mon, Jul 7, 2014 at 8:51 AM,  <[hidden email]> wrote:
>> Hi,
>>
>> I try to apply functional tests of tools against my instance of Galaxy. When
>> I launch run_functional_tests.sh with the default behavior on the local
>> machine for running the tests it works.
>> But when I try to run tests against an external instance deployed on
>> http://138.102.22.90:8080 and configuring environment variables as:
>> GALAXY_TEST_EXTERNAL=1, GALAXY_TEST_HOST=138.102.22.90 and
>> GALAXY_TEST_PORT=8080 and then launch run_functional_tests.sh,
>>  I have for answer the error:
>>
>> $ export GALAXY_TEST_EXTERNAL=1 && export GALAXY_TEST_HOST=138.102.22.90 &&
>> export GALAXY_TEST_PORT=8080
>> $ ./run_functional_tests.sh
>>
>> No handlers could be found for logger "functional_tests.py"
>>
>> I use the Galaxy Distribution of June 2, 2014, and my python version is
>> "Python 2.7.5". May I need to do another configurations in my instance
>> fortesting tools on an external instance?
>>
>> Thanks a lot,
>> Stéphane
>>
>> INRA - Unité MIG (Mathématique, Informatique et Génome)
>> F-78352 Jouy-en-Josas
>> [hidden email]
>>
>>
>> ___________________________________________________________
>> Please keep all replies on the list by using "reply all"
>> in your mail client.  To manage your subscriptions to this
>> and other Galaxy lists, please use the interface at:
>>   http://lists.bx.psu.edu/
>>
>> To search Galaxy mailing lists use the unified search at:
>>   http://galaxyproject.org/search/mailinglists/

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/