Questions about upgrading a toolshed instance

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Questions about upgrading a toolshed instance

Misharl Monsoor
Hi everybody,

In our lab, we have a Galaxy instance with runs also a toolshed.

Recently, we have upgraded our Galaxy instance (August 11 2014, "latest_2014.08.11 ") to the version January 13 2015, "latest_2015.01.13" .

My first question is to know if the upgrade of the Galaxy instance is sufficient to upgrade the toolshed instance?

If no, is there a procedure to upgrade the toolshed instance separately (a script to upgrade the toolshed database or other toolshed config files for example)?

Thank you very much by advance,

Bests regards,

Misharl.


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Re: Questions about upgrading a toolshed instance

Martin Čech
Hello Misharl,

Galaxy and TS share the codebase so if you run the TS form the same directory as Galaxy it has been already updated together with your Galaxy.
If there were any TS DB changes you will get a message during its startup with a hint on how to update the DB.

Let us know if you are having any problems with the process.

Thank you for using Galaxy (and ToolShed :)).

Martin, Galaxy Team

On Mon Feb 02 2015 at 1:18:06 PM Misharl Monsoor <[hidden email]> wrote:
Hi everybody,

In our lab, we have a Galaxy instance with runs also a toolshed.

Recently, we have upgraded our Galaxy instance (August 11 2014, "latest_2014.08.11 ") to the version January 13 2015, "latest_2015.01.13" .

My first question is to know if the upgrade of the Galaxy instance is sufficient to upgrade the toolshed instance?

If no, is there a procedure to upgrade the toolshed instance separately (a script to upgrade the toolshed database or other toolshed config files for example)?

Thank you very much by advance,

Bests regards,

Misharl.

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/