Recommended Hardware for Galaxy

classic Classic list List threaded Threaded
2 messages Options
Reply | Threaded
Open this post in threaded view
|

Recommended Hardware for Galaxy

Durdevic, Marija

Dear all,

 

In our Center for Medical Research we installed Galaxy server for our researchers. We are running Galaxy on login node (Virtual Machine) and job execution is on cluster configured using SLURM.

In Galaxy configuration we are using Supervisor-uWSGI-Nginx and two handlers. We are facing low performance problem and very slow Galaxy response.

 

Our Virtual Machine has 4 cores and 16GB of RAM memory. Is there any recommended hardware configuration for Galaxy?

 

Thanks in advance,

 

Marija

 


___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/
Reply | Threaded
Open this post in threaded view
|

Re: Recommended Hardware for Galaxy

Björn Grüning-3
Hi Maija,

this really depends on the amount of users you have and how many jobs
are scheduled at the same time.

As a general remark more handler can help and more cores can also help
because you can run more handlers.

Does it make your situation better if you increase the handlers to 4?

Ciao,
Bjoern

Am 29.07.2016 um 10:50 schrieb Durdevic, Marija:

> Dear all,
>
>  
>
> In our Center for Medical Research we installed Galaxy server for our
> researchers. We are running Galaxy on login node (Virtual Machine) and
> job execution is on cluster configured using SLURM.
>
> In Galaxy configuration we are using Supervisor-uWSGI-Nginx and two
> handlers. We are facing low performance problem and very slow Galaxy
> response.
>
>  
>
> Our Virtual Machine has 4 cores and 16GB of RAM memory. Is there any
> recommended hardware configuration for Galaxy?
>
>  
>
> Thanks in advance,
>
>  
>
> Marija
>
>  
>
>
>
> ___________________________________________________________
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
>   https://lists.galaxyproject.org/
>
> To search Galaxy mailing lists use the unified search at:
>   http://galaxyproject.org/search/mailinglists/
>
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/