SAM/BAM To Counts dataset generation errors

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SAM/BAM To Counts dataset generation errors

bravobih

When trying SAM/BAM to Counts I get the following error message:   pysam not installed; please install it

But a) pysam was not in this tool dependencies;
       b) pysam/0.7.7 is already installe



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Re: SAM/BAM To Counts dataset generation errors

Jennifer Jackson
Hello,

This question and this Biostar post are the same question, correct?
https://biostar.usegalaxy.org/p/7979/

Glad this is resolved. Next time, would be best to post to just one place.

Thanks!
Jen
Galaxy team

On 6/10/14 3:55 AM, Israel Bravo wrote:

When trying SAM/BAM to Counts I get the following error message:   pysam not installed; please install it

But a) pysam was not in this tool dependencies;
       b) pysam/0.7.7 is already installe



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Jennifer Hillman-Jackson
http://galaxyproject.org

___________________________________________________________
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Jennifer Hillman-Jackson
Galaxy Support and Training
http://galaxyproject.org