Trying to install GATK on up-to-date Galaxy install

classic Classic list List threaded Threaded
1 message Options
| Threaded
Open this post in threaded view
|

Trying to install GATK on up-to-date Galaxy install

Dooley, Damion
I seem to run into a bottleneck with the .package_pixman_0_32_4.  This seems to happen with both boris and devteam versions?  The same error is preventing cairo from installing.

libpng1.6.7packageInstalled
pixman0.32.4packageError/usr/local/galaxy/shared/tool_dependency/libpng/1.6.7/boris/package_libpng_1_6_7/7de5acbf6c85/lib: file not recognized: Is a directory
collect2: ld returned 1 exit status
make[2]: *** [clip-test] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all] Error 2

I appreciate any pointers on this!

Regards,

Damion

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/