Uploading files to Galaxy with nginx proxy server

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Uploading files to Galaxy with nginx proxy server

McCully, Dwayne (NIH/NIAMS) [C]

Hello Everyone,

 

Uploading a file does not complete with a listing of the file in the history section.  The file upload does reach 100 percent.

 

I’m getting the below error In my pastore.log file.  

 

 

galaxy.tools ERROR 2015-10-30 11:00:53,471 Checking parameter files failed. 'UploadDataset' object has no attribute 'from_html'

galaxy.tools ERROR 2015-10-30 11:00:53,589 tools::to_json() - Skipping parameter expansion for files.

Traceback (most recent call last):

  File "/home/niamsgalaxy/galaxy/lib/galaxy/tools/__init__.py", line 2550, in iterate

    tool_dict = input.to_dict(trans, other_values=other_values)

TypeError: to_dict() got an unexpected keyword argument 'other_values'

 

Any hints would be appreciated.

 

Dwayne


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Uploading files to Galaxy with nginx proxy server

McCully, Dwayne (NIH/NIAMS) [C]

Hello Everyone,

 

Uploading a file does not complete with a listing of the file in the history section.  The file upload does reach 100 percent.

Files are successfully being upload but not displayed.

 

I’m getting the below error In my pastore.log file.  

 

 

galaxy.tools ERROR 2015-10-30 11:00:53,471 Checking parameter files failed. 'UploadDataset' object has no attribute 'from_html'

galaxy.tools ERROR 2015-10-30 11:00:53,589 tools::to_json() - Skipping parameter expansion for files.

Traceback (most recent call last):

  File "/home/niamsgalaxy/galaxy/lib/galaxy/tools/__init__.py", line 2550, in iterate

    tool_dict = input.to_dict(trans, other_values=other_values)

TypeError: to_dict() got an unexpected keyword argument 'other_values'

 

Any hints would be appreciated.

 

Dwayne


___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/