bioblend run_tool function used with a tool containing repeats for inputs in its XML

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bioblend run_tool function used with a tool containing repeats for inputs in its XML

Olivia Doppelt
Dear Developpers,

I'm still trying to use the bioblend function run_tool and now that I've
uptdated my version of galaxy, the problem comes from the input_dict
used to define the inputs. The command line generated is right except
for the inputs information, it is either None are sometimes, nothing is
just written there.

I'm starting to think that it is due to the fact that in my xml tool,
there is a way to add as many inputs as needed using the repeats tag.

This maybe confuses the link between bioblend and galaxy as the
variables are named differently in the cheetah command line.

Is there an example of a run_tool utilisation ? somewhere ?

Thanks in advance for your help.
Have a nice day,

--
Olivia Doppelt-Azeroual, PhD
Tel: 92 15
CIB - Institut Pasteur

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