cufflinks suite 2.2.1

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cufflinks suite 2.2.1

Geert Vandeweyer-4
Hi all,

I've updated the tool wrappers for the cufflinks tools to options
supported by cufflinks 2.2.1. I've also added the cuffquant and cuffnorm
tools, together with the cxb datatype.

As discussed with Jeremy, these updates were welcome :-)

Everything is available on the test toolshed, tested and installed on at
least one instance (http://biomina.be/app/galaxy), although mixing main
and test toolshed installations doesn't work well. The tools are present
twice.

Therefore, feel free to integrate the updated wrappers & tools into the
main cufflinks package (by devteam) after further testing.

Best,

geert

--

Geert Vandeweyer, Ph.D.
Department of Medical Genetics
University of Antwerp
Prins Boudewijnlaan 43
2650 Edegem
Belgium
Tel: +32 (0)3 275 97 56
E-mail: [hidden email]
http://ua.ac.be/cognitivegenetics
http://www.linkedin.com/in/geertvandeweyer

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Re: cufflinks suite 2.2.1

Björn Grüning-3
Awesome!

Thanks Geert!
Bjoern

Am 04.08.2014 um 22:37 schrieb Geert Vandeweyer:

> Hi all,
>
> I've updated the tool wrappers for the cufflinks tools to options
> supported by cufflinks 2.2.1. I've also added the cuffquant and cuffnorm
> tools, together with the cxb datatype.
>
> As discussed with Jeremy, these updates were welcome :-)
>
> Everything is available on the test toolshed, tested and installed on at
> least one instance (http://biomina.be/app/galaxy), although mixing main
> and test toolshed installations doesn't work well. The tools are present
> twice.
>
> Therefore, feel free to integrate the updated wrappers & tools into the
> main cufflinks package (by devteam) after further testing.
>
> Best,
>
> geert
>
> --
>
> Geert Vandeweyer, Ph.D.
> Department of Medical Genetics
> University of Antwerp
> Prins Boudewijnlaan 43
> 2650 Edegem
> Belgium
> Tel: +32 (0)3 275 97 56
> E-mail: [hidden email]
> http://ua.ac.be/cognitivegenetics
> http://www.linkedin.com/in/geertvandeweyer
>
> ___________________________________________________________
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
>   http://lists.bx.psu.edu/
>
> To search Galaxy mailing lists use the unified search at:
>   http://galaxyproject.org/search/mailinglists/
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
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To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/