[hg] galaxy 1494: Fix functional test for count tool and correct...

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[hg] galaxy 1494: Fix functional test for count tool and correct...

greg
details:   http://www.bx.psu.edu/hg/galaxy/rev/d427760f8fec
changeset: 1494:d427760f8fec
user:      Greg Von Kuster <[hidden email]>
date:      Mon Sep 08 09:16:32 2008 -0400
description:
Fix functional test for count tool and correct spelling errors in template.

1 file(s) affected in this change:

tools/filters/uniq.xml

diffs (33 lines):

diff -r e85d660c46ee -r d427760f8fec tools/filters/uniq.xml
--- a/tools/filters/uniq.xml Fri Sep 05 16:36:51 2008 -0400
+++ b/tools/filters/uniq.xml Mon Sep 08 09:16:32 2008 -0400
@@ -1,9 +1,9 @@
 <tool id="Count1" name="Count">
-  <description>occurences of each record</description>
+  <description>occurrences of each record</description>
   <command interpreter="python">uniq.py -i $input -o $out_file1 -c "$column" -d $delim</command>
   <inputs>
     <param name="input" type="data" format="tabular" label="from query" help="Query missing? See TIP below"/>
-    <param name="column" type="data_column" data_ref="input" multiple="True" numerical="False" label="Count occurencies of values in column(s)" help="Multi-select list - hold the appropriate key while clicking to select multiple columns" />
+    <param name="column" type="data_column" data_ref="input" multiple="True" numerical="False" label="Count occurrences of values in column(s)" help="Multi-select list - hold the appropriate key while clicking to select multiple columns" />
     <param name="delim" type="select" label="Delimited by">
       <option value="T">Tab</option>
       <option value="Sp">Whitespace</option>
@@ -21,7 +21,7 @@
     <test>
       <param name="input" value="1.bed"/>
       <output name="out_file1" file="uniq_out.dat"/>
-      <param name="column" value="c1"/>
+      <param name="column" value="1"/>
       <param name="delim" value="T"/>
     </test>
   </tests>
@@ -35,7 +35,7 @@
 
 **Syntax**
 
-This tool counts occurences of unique values in selected column(s).
+This tool counts occurrences of unique values in selected column(s).
 
 - If multiple columns are selected, counting is performed on each unique group of all values in the selected columns.
 - The first column of the resulting query will be the count of unique values in the selected column(s) and will be followed by each value.