[hg] galaxy 1555: Updating test-output for Extract Orthologous m...

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[hg] galaxy 1555: Updating test-output for Extract Orthologous m...

Nate Coraor (nate@bx.psu.edu)
details:   http://www.bx.psu.edu/hg/galaxy/rev/0adda80bcef4
changeset: 1555:0adda80bcef4
user:      guru
date:      Tue Oct 14 10:58:43 2008 -0400
description:
Updating test-output for Extract Orthologous microsatellites tool, which now uses the modified sputnik.

1 file(s) affected in this change:

test-data/ortho_ms.tab

diffs (211 lines):

diff -r e612b6609af9 -r 0adda80bcef4 test-data/ortho_ms.tab
--- a/test-data/ortho_ms.tab Mon Oct 13 15:06:42 2008 -0400
+++ b/test-data/ortho_ms.tab Tue Oct 14 10:58:43 2008 -0400
@@ -1,106 +1,151 @@
 #Block Seq1_Name Seq1_Start Seq1_End Seq1_Type Seq1_Length Seq1_RepeatNumber Seq1_Unit Seq2_Name Seq2_Start Seq2_End Seq2_Type Seq2_Length Seq2_RepeatNumber Seq2_Unit
 5 hg18.chr1 6483 6496 trinucleotide 13 4 GCT panTro2.chr15 100042575 100042588 trinucleotide 13 4 GCT
+5 hg18.chr1 7111 7119 dinucleotide 8 4 CT panTro2.chr15 100043212 100043220 dinucleotide 8 4 CT
+5 hg18.chr1 6483 6496 trinucleotide 13 4 GCT panTro2.chr15 100042575 100042588 trinucleotide 13 4 GCT
+5 hg18.chr1 7111 7119 dinucleotide 8 4 CT panTro2.chr15 100043212 100043220 dinucleotide 8 4 CT
+9 hg18.chr1 11258 11267 dinucleotide 9 4 CT panTro2.chr9_random 4677431 4677440 dinucleotide 9 4 CT
+10 hg18.chr1 11881 11889 dinucleotide 8 4 TC panTro2.chr15 100031465 100031473 dinucleotide 8 4 TC
+10 hg18.chr1 18275 18284 mononucleotide 9 9 A panTro2.chr15 100037854 100037863 mononucleotide 9 9 A
+10 hg18.chr1 11881 11889 dinucleotide 8 4 TC panTro2.chr15 100031465 100031473 dinucleotide 8 4 TC
 10 hg18.chr1 16317 16329 dinucleotide 12 6 GT panTro2.chr15 100035910 100035921 dinucleotide 11 5 TG
+10 hg18.chr1 18275 18284 mononucleotide 9 9 A panTro2.chr15 100037854 100037863 mononucleotide 9 9 A
 10 hg18.chr1 18452 18467 mononucleotide 15 15 T panTro2.chr15 100038029 100038042 mononucleotide 13 13 T
 12 hg18.chr1 20736 20756 dinucleotide 20 10 TC panTro2.chr15_random 1091184 1091198 dinucleotide 14 7 TC
-13 hg18.chr1 20774 20786 dinucleotide 12 6 TC panTro2.chrUn 1510792 1510803 dinucleotide 11 5 TC
 13 hg18.chr1 20799 20812 dinucleotide 13 6 TC panTro2.chrUn 1510811 1510831 dinucleotide 20 10 TC
-13 hg18.chr1 20774 20786 dinucleotide 12 6 TC panTro2.chrUn 1510792 1510803 dinucleotide 11 5 TC
-13 hg18.chr1 20799 20812 dinucleotide 13 6 TC panTro2.chrUn 1510811 1510831 dinucleotide 20 10 TC
+13 hg18.chr1 21563 21572 dinucleotide 9 4 AG panTro2.chrUn 1511572 1511581 dinucleotide 9 4 AG
+13 hg18.chr1 21671 21681 dinucleotide 10 5 AC panTro2.chrUn 1511678 1511688 dinucleotide 10 5 AC
 14 hg18.chr1 23313 23328 mononucleotide 15 15 A panTro2.chrUn 1508926 1508942 mononucleotide 16 16 A
-14 hg18.chr1 23384 23405 mononucleotide 21 21 T panTro2.chrUn 1508999 1509025 mononucleotide 26 26 T
-15 hg18.chr1 25352 25371 tetranucleotide 19 4 AAAT panTro2.chr15_random 1087905 1087924 tetranucleotide 19 4 AAAT
 16 hg18.chr1 26215 26228 mononucleotide 13 13 A panTro2.chrUn 135175 135189 mononucleotide 14 14 A
+16 hg18.chr1 26657 26667 dinucleotide 10 5 TG panTro2.chrUn 135618 135628 dinucleotide 10 5 TG
+16 hg18.chr1 27104 27114 mononucleotide 10 10 T panTro2.chrUn 136064 136073 mononucleotide 9 9 T
+16 hg18.chr1 27291 27299 dinucleotide 8 4 CT panTro2.chrUn 136251 136259 dinucleotide 8 4 CT
 16 hg18.chr1 30483 30495 trinucleotide 12 4 TTC panTro2.chrUn 139435 139447 trinucleotide 12 4 TTC
 16 hg18.chr1 30503 30522 mononucleotide 19 19 T panTro2.chrUn 139457 139482 mononucleotide 25 25 T
+16 hg18.chr1 26657 26667 dinucleotide 10 5 TG panTro2.chrUn 135618 135628 dinucleotide 10 5 TG
+16 hg18.chr1 27104 27114 mononucleotide 10 10 T panTro2.chrUn 136064 136073 mononucleotide 9 9 T
+16 hg18.chr1 27291 27299 dinucleotide 8 4 CT panTro2.chrUn 136251 136259 dinucleotide 8 4 CT
+16 hg18.chr1 30483 30495 trinucleotide 12 4 TTC panTro2.chrUn 139435 139447 trinucleotide 12 4 TTC
 17 hg18.chr1 33660 33676 mononucleotide 16 16 A panTro2.chrUn 9698149 9698162 mononucleotide 13 13 A
-17 hg18.chr1 34037 34047 mononucleotide 10 10 A panTro2.chrUn 9698527 9698537 mononucleotide 10 10 A
+17 hg18.chr1 33660 33676 mononucleotide 16 16 A panTro2.chrUn 9698149 9698162 mononucleotide 13 13 A
+19 hg18.chr1 35586 35595 dinucleotide 9 4 AT panTro2.chrUn 9700318 9700327 dinucleotide 9 4 AT
+19 hg18.chr1 36427 36435 dinucleotide 8 4 GT panTro2.chrUn 9701160 9701168 dinucleotide 8 4 GT
 19 hg18.chr1 37182 37192 mononucleotide 10 10 A panTro2.chrUn 9701917 9701928 mononucleotide 11 11 A
-19 hg18.chr1 40345 40377 dinucleotide 32 16 GT panTro2.chrUn 9705094 9705126 dinucleotide 32 16 GT
+19 hg18.chr1 37620 37628 dinucleotide 8 4 TA panTro2.chrUn 9702357 9702365 dinucleotide 8 4 TA
+19 hg18.chr1 41199 41207 dinucleotide 8 4 CT panTro2.chrUn 9705949 9705957 dinucleotide 8 4 CT
 19 hg18.chr1 41728 41741 mononucleotide 13 13 A panTro2.chrUn 9706479 9706495 mononucleotide 16 16 A
-20 hg18.chr1 44576 44638 tetranucleotide 62 15 TTTC panTro2.chrUn 9709825 9709899 tetranucleotide 74 18 TTTC
-20 hg18.chr1 44654 44681 tetranucleotide 27 6 TTTC panTro2.chrUn 9709915 9709942 tetranucleotide 27 6 TTTC
-22 hg18.chr1 51726 51744 mononucleotide 18 18 T panTro2.chrUn 9717633 9717652 mononucleotide 19 19 T
-22 hg18.chr1 52103 52120 dinucleotide 17 8 AC panTro2.chrUn 9718011 9718024 dinucleotide 13 6 AC
-25 hg18.chr1 61983 61995 dinucleotide 12 6 TA panTro2.chrUn 9729161 9729173 dinucleotide 12 6 TA
-25 hg18.chr1 62004 62027 tetranucleotide 23 5 ATAC panTro2.chrUn 9729184 9729219 tetranucleotide 35 8 ATAC
-25 hg18.chr1 63706 63720 mononucleotide 14 14 T panTro2.chrUn 9730896 9730914 mononucleotide 18 18 T
+19 hg18.chr1 35586 35595 dinucleotide 9 4 AT panTro2.chrUn 9700318 9700327 dinucleotide 9 4 AT
+19 hg18.chr1 36427 36435 dinucleotide 8 4 GT panTro2.chrUn 9701160 9701168 dinucleotide 8 4 GT
+19 hg18.chr1 37182 37192 mononucleotide 10 10 A panTro2.chrUn 9701917 9701928 mononucleotide 11 11 A
+19 hg18.chr1 37620 37628 dinucleotide 8 4 TA panTro2.chrUn 9702357 9702365 dinucleotide 8 4 TA
+19 hg18.chr1 41199 41207 dinucleotide 8 4 CT panTro2.chrUn 9705949 9705957 dinucleotide 8 4 CT
+19 hg18.chr1 41728 41741 mononucleotide 13 13 A panTro2.chrUn 9706479 9706495 mononucleotide 16 16 A
+21 hg18.chr1 47418 47426 dinucleotide 8 4 TA panTro2.chrUn 9713027 9713035 dinucleotide 8 4 TA
+21 hg18.chr1 47950 47959 dinucleotide 9 4 TC panTro2.chrUn 9713559 9713568 dinucleotide 9 4 TC
+21 hg18.chr1 47418 47426 dinucleotide 8 4 TA panTro2.chrUn 9713027 9713035 dinucleotide 8 4 TA
+21 hg18.chr1 47950 47959 dinucleotide 9 4 TC panTro2.chrUn 9713559 9713568 dinucleotide 9 4 TC
+25 hg18.chr1 56744 56752 dinucleotide 8 4 GA panTro2.chrUn 9723923 9723931 dinucleotide 8 4 GA
+25 hg18.chr1 60215 60224 mononucleotide 9 9 A panTro2.chrUn 9727396 9727405 mononucleotide 9 9 A
+25 hg18.chr1 56744 56752 dinucleotide 8 4 GA panTro2.chrUn 9723923 9723931 dinucleotide 8 4 GA
+25 hg18.chr1 60215 60224 mononucleotide 9 9 A panTro2.chrUn 9727396 9727405 mononucleotide 9 9 A
+25 hg18.chr1 61039 61050 mononucleotide 11 11 A panTro2.chrUn 9728220 9728230 mononucleotide 10 10 A
+25 hg18.chr1 61710 61725 mononucleotide 15 15 T panTro2.chrUn 9728890 9728903 mononucleotide 13 13 T
+26 hg18.chr1 67953 67961 dinucleotide 8 4 AT panTro2.chrUn 9735669 9735677 dinucleotide 8 4 AT
+26 hg18.chr1 68606 68614 dinucleotide 8 4 AT panTro2.chrUn 9736324 9736332 dinucleotide 8 4 AT
 26 hg18.chr1 67038 67059 mononucleotide 21 21 A panTro2.chrUn 9734760 9734777 mononucleotide 17 17 A
+26 hg18.chr1 67953 67961 dinucleotide 8 4 AT panTro2.chrUn 9735669 9735677 dinucleotide 8 4 AT
+26 hg18.chr1 68606 68614 dinucleotide 8 4 AT panTro2.chrUn 9736324 9736332 dinucleotide 8 4 AT
 27 hg18.chr1 72077 72088 dinucleotide 11 5 AC panTro2.chrUn 9742946 9742957 dinucleotide 11 5 AC
-28 hg18.chr1 73838 73906 tetranucleotide 68 17 AAAG panTro2.chr15 99975357 99975380 tetranucleotide 23 5 AAAG
-28 hg18.chr1 73838 73906 tetranucleotide 68 17 AAAG panTro2.chr15 99975357 99975380 tetranucleotide 23 5 AAAG
-32 hg18.chr1 81064 81077 mononucleotide 13 13 A panTro2.chrUn 1797471 1797489 mononucleotide 18 18 A
-35 hg18.chr1 82527 82541 mononucleotide 14 14 A panTro2.chr1_random 7070707 7070721 mononucleotide 14 14 A
+32 hg18.chr1 81043 81052 dinucleotide 9 4 GA panTro2.chrUn 1797450 1797459 dinucleotide 9 4 GA
+39 hg18.chr1 87721 87729 dinucleotide 8 4 AG panTro2.chr1_random 7074333 7074341 dinucleotide 8 4 AG
+39 hg18.chr1 88697 88707 dinucleotide 10 5 TG panTro2.chr1_random 7075309 7075319 dinucleotide 10 5 TG
+39 hg18.chr1 87721 87729 dinucleotide 8 4 AG panTro2.chr1_random 7074333 7074341 dinucleotide 8 4 AG
+39 hg18.chr1 88697 88707 dinucleotide 10 5 TG panTro2.chr1_random 7075309 7075319 dinucleotide 10 5 TG
 40 hg18.chr1 91199 91212 mononucleotide 13 13 A panTro2.chr1_random 7089889 7089900 mononucleotide 11 11 A
-41 hg18.chr1 91538 91554 mononucleotide 16 16 A panTro2.chr1 223998154 223998167 mononucleotide 13 13 A
-42 hg18.chr1 94024 94060 dinucleotide 36 18 AC panTro2.chr1_random 7090945 7090970 dinucleotide 25 12 AC
-42 hg18.chr1 95472 95491 dinucleotide 19 9 AT panTro2.chr1_random 7092383 7092404 dinucleotide 21 10 AT
-43 hg18.chr1 96802 96815 dinucleotide 13 6 TC panTro2.chr1 243988 244001 dinucleotide 13 6 TC
+42 hg18.chr1 93838 93847 dinucleotide 9 4 CT panTro2.chr1_random 7090757 7090768 dinucleotide 11 5 CT
+42 hg18.chr1 93838 93847 dinucleotide 9 4 CT panTro2.chr1_random 7090757 7090768 dinucleotide 11 5 CT
+43 hg18.chr1 97391 97399 dinucleotide 8 4 AG panTro2.chr1 244578 244586 dinucleotide 8 4 AG
 44 hg18.chr1 98409 98425 mononucleotide 16 16 A panTro2.chr1_random 7095323 7095342 mononucleotide 19 19 A
-45 hg18.chr1 99439 99478 dinucleotide 39 19 GT panTro2.chr1 246661 246696 dinucleotide 35 17 GT
-45 hg18.chr1 100799 100809 mononucleotide 10 10 A panTro2.chr1 248017 248028 mononucleotide 11 11 A
-45 hg18.chr1 101230 101250 mononucleotide 20 20 A panTro2.chr1 248453 248467 mononucleotide 14 14 A
+44 hg18.chr1 98409 98425 mononucleotide 16 16 A panTro2.chr1_random 7095323 7095342 mononucleotide 19 19 A
+46 hg18.chr1 101851 101859 dinucleotide 8 4 CA panTro2.chr1_random 7109861 7109869 dinucleotide 8 4 CA
+47 hg18.chr1 103743 103753 dinucleotide 10 5 CT panTro2.chr1 250633 250643 dinucleotide 10 5 CT
+47 hg18.chr1 104174 104182 dinucleotide 8 4 GA panTro2.chr1 251064 251072 dinucleotide 8 4 GA
+47 hg18.chr1 107676 107685 dinucleotide 9 4 AG panTro2.chr1 254594 254603 dinucleotide 9 4 AG
+47 hg18.chr1 107735 107743 dinucleotide 8 4 AG panTro2.chr1 254653 254661 dinucleotide 8 4 AG
+47 hg18.chr1 108222 108231 dinucleotide 9 4 AT panTro2.chr1 255140 255148 dinucleotide 8 4 AT
+47 hg18.chr1 108253 108261 dinucleotide 8 4 AT panTro2.chr1 255171 255179 dinucleotide 8 4 AT
+47 hg18.chr1 103743 103753 dinucleotide 10 5 CT panTro2.chr1 250633 250643 dinucleotide 10 5 CT
+47 hg18.chr1 104174 104182 dinucleotide 8 4 GA panTro2.chr1 251064 251072 dinucleotide 8 4 GA
+47 hg18.chr1 107676 107685 dinucleotide 9 4 AG panTro2.chr1 254594 254603 dinucleotide 9 4 AG
+47 hg18.chr1 107735 107743 dinucleotide 8 4 AG panTro2.chr1 254653 254661 dinucleotide 8 4 AG
+47 hg18.chr1 108222 108231 dinucleotide 9 4 AT panTro2.chr1 255140 255148 dinucleotide 8 4 AT
+47 hg18.chr1 108253 108261 dinucleotide 8 4 AT panTro2.chr1 255171 255179 dinucleotide 8 4 AT
+48 hg18.chr1 110072 110081 dinucleotide 9 4 TG panTro2.chr1 258778 258787 dinucleotide 9 4 TG
+48 hg18.chr1 110072 110081 dinucleotide 9 4 TG panTro2.chr1 258778 258787 dinucleotide 9 4 TG
 49 hg18.chr1 111133 111148 mononucleotide 15 15 T panTro2.chr1 260455 260473 mononucleotide 18 18 T
 49 hg18.chr1 111503 111515 trinucleotide 12 4 TAA panTro2.chr1 260828 260846 trinucleotide 18 6 TAA
-49 hg18.chr1 112927 112938 dinucleotide 11 5 CA panTro2.chr1 262255 262267 dinucleotide 12 6 AC
-49 hg18.chr1 112974 112995 dinucleotide 21 10 TA panTro2.chr1 262299 262320 dinucleotide 21 10 TA
+51 hg18.chr1 113280 113290 dinucleotide 10 5 AT panTro2.chr1_random 8247726 8247736 dinucleotide 10 5 AT
 55 hg18.chr1 114709 114728 mononucleotide 19 19 A panTro2.chr1 262958 262973 mononucleotide 15 15 A
+55 hg18.chr1 115520 115529 mononucleotide 9 9 A panTro2.chr1 263765 263775 mononucleotide 10 10 A
 55 hg18.chr1 114709 114728 mononucleotide 19 19 A panTro2.chr1 262958 262973 mononucleotide 15 15 A
 56 hg18.chr1 118460 118475 mononucleotide 15 15 T panTro2.chr1 267602 267617 mononucleotide 15 15 T
 56 hg18.chr1 119541 119556 mononucleotide 15 15 T panTro2.chr1 268682 268695 mononucleotide 13 13 T
-56 hg18.chr1 120154 120164 mononucleotide 10 10 A panTro2.chr1 269287 269300 mononucleotide 13 13 A
+56 hg18.chr1 119775 119783 dinucleotide 8 4 GA panTro2.chr1 268914 268922 dinucleotide 8 4 GA
 56 hg18.chr1 123929 123958 mononucleotide 29 29 T panTro2.chr1 273095 273130 mononucleotide 35 35 T
-56 hg18.chr1 118460 118475 mononucleotide 15 15 T panTro2.chr1 267602 267617 mononucleotide 15 15 T
-56 hg18.chr1 119541 119556 mononucleotide 15 15 T panTro2.chr1 268682 268695 mononucleotide 13 13 T
-56 hg18.chr1 120154 120164 mononucleotide 10 10 A panTro2.chr1 269287 269300 mononucleotide 13 13 A
-72 hg18.chr1 131317 131331 trinucleotide 14 4 TTA panTro2.chr1_random 7185786 7185800 trinucleotide 14 4 TTA
 72 hg18.chr1 134751 134763 mononucleotide 12 12 A panTro2.chr1_random 7189181 7189197 mononucleotide 16 16 A
 72 hg18.chr1 134994 135006 trinucleotide 12 4 GTG panTro2.chr1_random 7189427 7189439 trinucleotide 12 4 GTG
-72 hg18.chr1 136901 136911 mononucleotide 10 10 A panTro2.chr1_random 7191338 7191350 mononucleotide 12 12 A
-72 hg18.chr1 137298 137339 trinucleotide 41 13 AAC panTro2.chr1_random 7191741 7191782 trinucleotide 41 13 AAC
+72 hg18.chr1 135805 135813 dinucleotide 8 4 GT panTro2.chr1_random 7190238 7190246 dinucleotide 8 4 GT
+72 hg18.chr1 136433 136442 dinucleotide 9 4 TC panTro2.chr1_random 7190866 7190875 dinucleotide 9 4 TC
 72 hg18.chr1 137771 137781 mononucleotide 10 10 A panTro2.chr1_random 7192213 7192224 mononucleotide 11 11 A
 72 hg18.chr1 138639 138652 trinucleotide 13 4 AAT panTro2.chr1_random 7193082 7193095 trinucleotide 13 4 AAT
-72 hg18.chr1 139543 139563 mononucleotide 20 20 A panTro2.chr1_random 7193986 7194009 mononucleotide 23 23 A
+72 hg18.chr1 140196 140205 dinucleotide 9 4 AG panTro2.chr1_random 7194642 7194651 dinucleotide 9 4 AG
 72 hg18.chr1 141348 141361 mononucleotide 13 13 T panTro2.chr1_random 7195790 7195814 mononucleotide 24 24 T
+72 hg18.chr1 134994 135006 trinucleotide 12 4 GTG panTro2.chr1_random 7189427 7189439 trinucleotide 12 4 GTG
+72 hg18.chr1 135805 135813 dinucleotide 8 4 GT panTro2.chr1_random 7190238 7190246 dinucleotide 8 4 GT
+72 hg18.chr1 136433 136442 dinucleotide 9 4 TC panTro2.chr1_random 7190866 7190875 dinucleotide 9 4 TC
+72 hg18.chr1 138639 138652 trinucleotide 13 4 AAT panTro2.chr1_random 7193082 7193095 trinucleotide 13 4 AAT
+72 hg18.chr1 140196 140205 dinucleotide 9 4 AG panTro2.chr1_random 7194642 7194651 dinucleotide 9 4 AG
+72 hg18.chr1 142689 142699 mononucleotide 10 10 T panTro2.chr1_random 7197149 7197158 mononucleotide 9 9 T
 73 hg18.chr1 145718 145733 mononucleotide 15 15 A panTro2.chr1_random 7202121 7202135 mononucleotide 14 14 A
 74 hg18.chr1 146143 146155 mononucleotide 12 12 T panTro2.chr1_random 7208622 7208632 mononucleotide 10 10 T
 74 hg18.chr1 146971 146985 mononucleotide 14 14 A panTro2.chr1_random 7209449 7209463 mononucleotide 14 14 A
-75 hg18.chr1 148861 148895 dinucleotide 34 17 AC panTro2.chr1_random 7211571 7211605 dinucleotide 34 17 AC
 75 hg18.chr1 150335 150351 mononucleotide 16 16 T panTro2.chr1_random 7213029 7213047 mononucleotide 18 18 T
-75 hg18.chr1 152174 152208 tetranucleotide 34 8 GGAG panTro2.chr1_random 7214870 7214904 tetranucleotide 34 8 GGAG
+75 hg18.chr1 151431 151440 mononucleotide 9 9 A panTro2.chr1_random 7214127 7214137 mononucleotide 10 10 A
 75 hg18.chr1 153993 154017 pentanucleotide 24 4 AAAAC panTro2.chr1_random 7216686 7216711 pentanucleotide 25 5 AAAAC
 75 hg18.chr1 155151 155174 mononucleotide 23 23 A panTro2.chr1_random 7217843 7217867 mononucleotide 24 24 A
+75 hg18.chr1 156454 156463 mononucleotide 9 9 A panTro2.chr1_random 7219148 7219157 mononucleotide 9 9 A
 75 hg18.chr1 156998 157017 tetranucleotide 19 4 TTTA panTro2.chr1_random 7219691 7219710 tetranucleotide 19 4 TTTA
-75 hg18.chr1 148861 148895 dinucleotide 34 17 AC panTro2.chr1_random 7211571 7211605 dinucleotide 34 17 AC
-75 hg18.chr1 152174 152208 tetranucleotide 34 8 GGAG panTro2.chr1_random 7214870 7214904 tetranucleotide 34 8 GGAG
+75 hg18.chr1 151431 151440 mononucleotide 9 9 A panTro2.chr1_random 7214127 7214137 mononucleotide 10 10 A
 75 hg18.chr1 153993 154017 pentanucleotide 24 4 AAAAC panTro2.chr1_random 7216686 7216711 pentanucleotide 25 5 AAAAC
 75 hg18.chr1 154537 154559 mononucleotide 22 22 A panTro2.chr1_random 7217231 7217251 mononucleotide 20 20 A
+75 hg18.chr1 156454 156463 mononucleotide 9 9 A panTro2.chr1_random 7219148 7219157 mononucleotide 9 9 A
 75 hg18.chr1 156998 157017 tetranucleotide 19 4 TTTA panTro2.chr1_random 7219691 7219710 tetranucleotide 19 4 TTTA
 76 hg18.chr1 159723 159736 mononucleotide 13 13 T panTro2.chr1 224074251 224074269 mononucleotide 18 18 T
 76 hg18.chr1 160798 160818 pentanucleotide 20 4 GTTTT panTro2.chr1 224075335 224075355 pentanucleotide 20 4 GTTTT
-77 hg18.chr1 164907 164918 dinucleotide 11 5 CA panTro2.chr1_random 7295345 7295356 dinucleotide 11 5 CA
+76 hg18.chr1 159723 159736 mononucleotide 13 13 T panTro2.chr1 224074251 224074269 mononucleotide 18 18 T
+76 hg18.chr1 160798 160818 pentanucleotide 20 4 GTTTT panTro2.chr1 224075335 224075355 pentanucleotide 20 4 GTTTT
+77 hg18.chr1 163076 163084 dinucleotide 8 4 AT panTro2.chr1_random 7293459 7293467 dinucleotide 8 4 AT
+77 hg18.chr1 165179 165187 dinucleotide 8 4 GC panTro2.chr1_random 7295617 7295625 dinucleotide 8 4 GC
 77 hg18.chr1 165310 165322 mononucleotide 12 12 A panTro2.chr1_random 7295748 7295770 mononucleotide 22 22 A
-77 hg18.chr1 164907 164918 dinucleotide 11 5 CA panTro2.chr1_random 7295345 7295356 dinucleotide 11 5 CA
+77 hg18.chr1 163076 163084 dinucleotide 8 4 AT panTro2.chr1_random 7293459 7293467 dinucleotide 8 4 AT
+77 hg18.chr1 165179 165187 dinucleotide 8 4 GC panTro2.chr1_random 7295617 7295625 dinucleotide 8 4 GC
 77 hg18.chr1 165310 165322 mononucleotide 12 12 A panTro2.chr1_random 7295748 7295770 mononucleotide 22 22 A
-78 hg18.chr1 166066 166095 pentanucleotide 29 5 AAAAC panTro2.chr1 224080667 224080691 pentanucleotide 24 4 AAAAC
+83 hg18.chr1 219668 219689 tetranucleotide 21 5 TAAA panTro2.chr3 77587413 77587435 tetranucleotide 22 5 TAAA
 83 hg18.chr1 219668 219689 tetranucleotide 21 5 TAAA panTro2.chr3 77587413 77587435 tetranucleotide 22 5 TAAA
 87 hg18.chr1 222298 222309 mononucleotide 11 11 T panTro2.chrUn 1781936 1781946 mononucleotide 10 10 T
 87 hg18.chr1 222298 222309 mononucleotide 11 11 T panTro2.chrUn 1781936 1781946 mononucleotide 10 10 T
+89 hg18.chr1 224906 224915 mononucleotide 9 9 T panTro2.chrUn 1780175 1780184 mononucleotide 9 9 T
+89 hg18.chr1 224906 224915 mononucleotide 9 9 T panTro2.chrUn 1780175 1780184 mononucleotide 9 9 T
+93 hg18.chr1 227371 227380 dinucleotide 9 4 GA panTro2.chr1_random 7325572 7325581 dinucleotide 9 4 GA
 93 hg18.chr1 227392 227408 mononucleotide 16 16 A panTro2.chr1_random 7325593 7325616 mononucleotide 23 23 A
-93 hg18.chr1 228854 228869 mononucleotide 15 15 A panTro2.chr1_random 7327066 7327078 mononucleotide 12 12 A
-94 hg18.chr1 231193 231209 mononucleotide 16 16 T panTro2.chr1 223990552 223990572 mononucleotide 20 20 T
-97 hg18.chr1 235198 235229 tetranucleotide 31 7 TTTA panTro2.chr1_random 7331178 7331221 tetranucleotide 43 10 TTTA
-97 hg18.chr1 235279 235294 mononucleotide 15 15 T panTro2.chr1_random 7331271 7331290 mononucleotide 19 19 T
+93 hg18.chr1 227371 227380 dinucleotide 9 4 GA panTro2.chr1_random 7325572 7325581 dinucleotide 9 4 GA
+96 hg18.chr1 234056 234064 dinucleotide 8 4 AG panTro2.chr1_random 8589985 8589993 dinucleotide 8 4 AG
+97 hg18.chr1 235032 235042 dinucleotide 10 5 TG panTro2.chr1_random 7331012 7331022 dinucleotide 10 5 TG
 97 hg18.chr1 237516 237529 mononucleotide 13 13 A panTro2.chr1_random 7333512 7333527 mononucleotide 15 15 A
-98 hg18.chr1 237855 237870 mononucleotide 15 15 A panTro2.chr1 223998154 223998167 mononucleotide 13 13 A
-99 hg18.chr1 240341 240375 dinucleotide 34 17 AC panTro2.chr1_random 7334566 7334615 dinucleotide 49 24 AC
-99 hg18.chr1 241787 241806 dinucleotide 19 9 AT panTro2.chr1_random 7336030 7336051 dinucleotide 21 10 AT
-99 hg18.chr1 243117 243130 dinucleotide 13 6 TC panTro2.chr1_random 7337363 7337376 dinucleotide 13 6 TC
+99 hg18.chr1 240155 240164 dinucleotide 9 4 CT panTro2.chr1_random 7334380 7334389 dinucleotide 9 4 CT
+99 hg18.chr1 243706 243714 dinucleotide 8 4 AG panTro2.chr1_random 7337953 7337961 dinucleotide 8 4 AG
 99 hg18.chr1 244724 244746 mononucleotide 22 22 A panTro2.chr1_random 7338970 7338987 mononucleotide 17 17 A
-99 hg18.chr1 240341 240375 dinucleotide 34 17 AC panTro2.chr1_random 7334566 7334615 dinucleotide 49 24 AC
-99 hg18.chr1 241787 241806 dinucleotide 19 9 AT panTro2.chr1_random 7336030 7336051 dinucleotide 21 10 AT
-99 hg18.chr1 243117 243130 dinucleotide 13 6 TC panTro2.chr1_random 7337363 7337376 dinucleotide 13 6 TC
+99 hg18.chr1 240155 240164 dinucleotide 9 4 CT panTro2.chr1_random 7334380 7334389 dinucleotide 9 4 CT
+99 hg18.chr1 243706 243714 dinucleotide 8 4 AG panTro2.chr1_random 7337953 7337961 dinucleotide 8 4 AG
 99 hg18.chr1 244724 244746 mononucleotide 22 22 A panTro2.chr1_random 7338970 7338987 mononucleotide 17 17 A
-99 hg18.chr1 245760 245793 dinucleotide 33 16 GT panTro2.chr1_random 7340006 7340026 dinucleotide 20 10 TG
-100 hg18.chr1 247114 247124 mononucleotide 10 10 A panTro2.chr1_random 7108808 7108818 mononucleotide 10 10 A
-100 hg18.chr1 247545 247565 mononucleotide 20 20 A panTro2.chr1_random 7109243 7109259 mononucleotide 16 16 A
+100 hg18.chr1 248168 248176 dinucleotide 8 4 CA panTro2.chr1_random 7109861 7109869 dinucleotide 8 4 CA
+100 hg18.chr1 248168 248176 dinucleotide 8 4 CA panTro2.chr1_random 7109861 7109869 dinucleotide 8 4 CA