rpy2 Core Tools

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rpy2 Core Tools

John Chilton
I had promised these to someone on a bitbucket issue years ago and I
said I would send them to Dannon and Nate on IRC today, so I am just
going to spam these out far and wide. These are the MSI versions of
many of the core tools that have been rewritten to target rpy2 instead
of rpy . Caveat emptor, these were never meant for external
consumption.

It looks like the ones we never got to include: rgenetics/rgQC.py,
regVariation/rcve.py, ngs_simulation/ngs_simulation.py,
metag_tools/short_reads_figure_high_quality_length.py, and
taxonomy/poisson2test.py.

-John

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cca.py (9K) Download Attachment
pca.py (7K) Download Attachment
kcca.py (7K) Download Attachment
kpca.py (7K) Download Attachment
scatterplot.py (3K) Download Attachment
histogram.py (4K) Download Attachment
logistic_regression_vif.py (9K) Download Attachment
linear_regression.py (6K) Download Attachment
partialR_square.py (7K) Download Attachment
gsummary.py (6K) Download Attachment
cor.py (4K) Download Attachment
short_reads_figure_score.py (11K) Download Attachment
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Re: rpy2 Core Tools

Hans-Rudolf Hotz
This is great! We will use them

Thank you very much


Hans-Rudolf


On 05/16/2013 05:01 PM, John Chilton wrote:

> I had promised these to someone on a bitbucket issue years ago and I
> said I would send them to Dannon and Nate on IRC today, so I am just
> going to spam these out far and wide. These are the MSI versions of
> many of the core tools that have been rewritten to target rpy2 instead
> of rpy . Caveat emptor, these were never meant for external
> consumption.
>
> It looks like the ones we never got to include: rgenetics/rgQC.py,
> regVariation/rcve.py, ngs_simulation/ngs_simulation.py,
> metag_tools/short_reads_figure_high_quality_length.py, and
> taxonomy/poisson2test.py.
>
> -John
>
>
>
> ___________________________________________________________
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
>    http://lists.bx.psu.edu/
>
> To search Galaxy mailing lists use the unified search at:
>    http://galaxyproject.org/search/mailinglists/
>
___________________________________________________________
Please keep all replies on the list by using "reply all"
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  http://galaxyproject.org/search/mailinglists/