I do not fully understand the "parameters and configuration" part in PBS section of the wiki page. Where exactly the "runner" XML snippet with <plugin> and <destinations> should be placed?
Also wondering if the snippet will be required for all tools that I want to run on compute nodes or is it a global setting? Can I tell existing tools to use this setup?
Another question is, can I configure Galaxy to submit jobs to compute cluster as a mortal user and not an admin of the system?
Thanks, -- Ketan
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