support for newer versions of Torque

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support for newer versions of Torque

Malcolm Tobias

I'm having trouble "scrambling my eggs".

I'm trying to build PBS support into Galaxy on a cluster running Torque >5.0.
The problem seems to be with pbs_python 4.4.0 which doesn't build against
newer versions of Torque. I was able to download 4.6.0 and was able to build
it from:

ftp://ftp.surfsara.nl/pub/outgoing/pbs_python.tar.gz

but I'm not sure how to integrate that build with Galaxy. It seems if 4.6.0
was available from:

http://eggs.galaxyproject.org/pbs_python/

I'd have a chance.

Any thoughts?

Cheers,
Malcolm

--
Malcolm Tobias
314.362.1594


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Re: support for newer versions of Torque

Malcolm Tobias

Any suggestions on how to handle this?

Without being to integrate Galaxy with our queuing system it's hard to use it
as a production environment.

Cheers,
Malcolm

On Friday, October 30, 2015 08:16:17 AM Malcolm Tobias wrote:

> I'm having trouble "scrambling my eggs".
>
> I'm trying to build PBS support into Galaxy on a cluster running Torque
> >5.0. The problem seems to be with pbs_python 4.4.0 which doesn't build
> against newer versions of Torque. I was able to download 4.6.0 and was able
> to build it from:
>
> ftp://ftp.surfsara.nl/pub/outgoing/pbs_python.tar.gz
>
> but I'm not sure how to integrate that build with Galaxy. It seems if 4.6.0
> was available from:
>
> http://eggs.galaxyproject.org/pbs_python/
>
> I'd have a chance.
>
> Any thoughts?
>
> Cheers,
> Malcolm
--
Malcolm Tobias
314.362.1594


___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
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